New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	337784 =	60 (1.430)	11 (0.330)	13/210	1.7	21.9%	intergenic (‑31/+98)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease
	?	NC_002947	337868 =	31 (0.930)					intergenic (‑115/+14)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease

CCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTT  >  NC_002947/337639‑337929                                                                                                                                                  |                                                                                                                                                   ccAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTcg                                                                                                                                                <  2:168189/150‑1 (MQ=255)      tGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGc                                                                                                                                           >  2:1417/1‑150 (MQ=255)        cAGGCCTGTGAGGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCAc                                                                                                                                         <  2:58302/150‑1 (MQ=255)           gCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGGGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGcc                                                                                                                                      <  2:241638/150‑1 (MQ=255)                cggtggaaatcttcttcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTc                                                                                                                                 >  1:239652‑M1/131‑150 (MQ=255)                 gAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTAAGGTGGGGGCTGTGGAGGTGGATGGGCATGGCAAGGATATGAGGTGGTTGTGAGGTGCAGTTCGCGGGCCCGCGCGCTcc                                                                                                                                >  2:115398/1‑150 (MQ=255)                  gtggaaatcttcttcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTccc                                                                                                                               <  2:923906‑M1/22‑1 (MQ=255)                  aaGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCGTGCCCGcgaa                                                                                                                                <  1:1049447/149‑4 (MQ=255)                  aaGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCGTGCCCGcgaa                                                                                                                                >  2:1049447/1‑146 (MQ=255)                   tggaaatcttcttcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccacggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCca                                                                                                                              >  2:374925‑M1/128‑150 (MQ=255)                   tggaaatcttcttcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCca                                                                                                                              <  2:548221‑M1/23‑1 (MQ=255)                    ggggCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCAGGCCCGCTGCcac                                                                                                                             >  1:967005/1‑150 (MQ=255)                      aaatcttcttcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                           >  1:856903‑M1/125‑150 (MQ=255)                        atcttcttcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGt                                                                                                                         >  2:174351‑M1/123‑150 (MQ=255)                          gggTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGtat                                                                                                                       <  2:720879/149‑1 (MQ=255)                          cgGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGtgt                                                                                                                       <  1:168410/150‑3 (MQ=255)                           ttcttcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGCGCACGCCCGCTCCcacaggcgta                                                                                                                      <  2:967005‑M1/31‑5 (MQ=255)                                ccACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGc                                                                                                                                   >  2:912979/1‑132 (MQ=255)                                ccACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGc                                                                                                                                   <  1:912979/132‑1 (MQ=255)                                ccACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGcc                                                                                                                 <  2:374271/150‑1 (MQ=255)                                  acaGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCCGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCc‑ac                                                                                                              >  1:944849/1‑150 (MQ=255)                                        gctgGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCaa                                                                                                        >  2:216976/1‑150 (MQ=255)                                         ctgGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAg                                                                                                       >  2:88792/1‑150 (MQ=255)                                         ctgGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAg                                                                                                       <  1:327863/150‑1 (MQ=255)                                           ggTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGt                                                                                                     <  1:319122/150‑1 (MQ=255)                                            gTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGtt                                                                                                    <  2:332970/150‑1 (MQ=255)                                             tGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTg                                                                                                   <  1:446185/150‑1 (MQ=255)                                                   ctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggtggcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTa                                                                                             >  1:133298‑M1/96‑150 (MQ=255)                                                   aTCAGGAACTGGTCGAGGGCCTGGACGCGGGTGCAAATTTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGACGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCGAGGTTGGCGCTa                                                                                             >  1:873835/1‑150 (MQ=255)                                                        gAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCt                                                                                        >  1:788886/1‑150 (MQ=255)                                                          tctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCC‑ACATTCAAGGTTGGCGCTACACCtgt                                                                                      >  2:774995‑M1/89‑150 (MQ=255)                                                          aCTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATG‑TGGCGCTATACCtgt                                                                                      <  2:906083/150‑1 (MQ=25)                                                          aCTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCAACCTTGAATG‑TGGCGCTATACCtgt                                                                                      <  2:41177/150‑1 (MQ=25)                                                           ctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCtgtg                                                                                     >  2:366970‑M1/88‑150 (MQ=255)                                                           cTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGTCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCtgtg                                                                                     <  1:366101/150‑1 (MQ=255)                                                            gggTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATG‑TGGCGCTATACCTGTgg                                                                                    <  2:232670/149‑1 (MQ=21)                                                              gttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCtgt                                                                                      <  2:658964‑M1/62‑1 (MQ=255)                                                              gttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCtgt                                                                                      >  1:658964‑M1/85‑146 (MQ=255)                                                              gTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGt                                                                                                                         <  2:492253/112‑1 (MQ=255)                                                              gTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGt                                                                                                                         >  1:492253/1‑112 (MQ=255)                                                              gTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGa                                                                                  <  1:88792/150‑1 (MQ=255)                                                               tCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAg                                                                                                       >  1:90926/1‑128 (MQ=255)                                                               tCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAg                                                                                                       <  2:90926/128‑1 (MQ=255)                                                                   gggCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCggg                                                                             <  1:885390/150‑1 (MQ=255)                                                                    gctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCC‑ACATTCAAGGTTgg                                                                                                  <  2:674098‑M1/50‑1 (MQ=255)                                                                    gctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCC‑ACATTCAAGGTTgg                                                                                                  >  1:674098‑M1/79‑128 (MQ=255)                                                                      ccTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTac                                                                                            >  1:375939/1‑132 (MQ=255)                                                                      ccTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTac                                                                                            <  2:375939/132‑1 (MQ=255)                                                                      ccTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGt                                                                          <  1:342798/150‑1 (MQ=255)                                                                        tGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGc                                                                        <  1:216976/150‑1 (MQ=255)                                                                             aggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                           >  1:529979‑M1/70‑95 (MQ=255)                                                                             aggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                           <  2:529979‑M1/26‑1 (MQ=255)                                                                              cGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGa                                                                  <  2:944849/150‑1 (MQ=255)                                                                               gcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                           >  2:42587‑M1/68‑93 (MQ=255)                                                                               gcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                           <  1:42587‑M1/26‑1 (MQ=255)                                                                                 gTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTgg                                                                                                  <  1:71359/115‑1 (MQ=255)                                                                                 gTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTgg                                                                                                  >  2:71359/1‑115 (MQ=255)                                                                                      tAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGcagtca                                                          <  2:788886/150‑1 (MQ=255)                                                                                        ggTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCGCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACGCCTGTGGGAGCGGGCGTGCCCGCGAAGcagtcagt                                                        <  1:820563/150‑1 (MQ=255)                                                                                         gTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                           >  1:373962/1‑83 (MQ=255)                                                                                         gTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATCTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                           <  2:373962/83‑1 (MQ=255)                                                                                              ggCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACGTATGGGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGtc                                                  >  1:535381/1‑150 (MQ=255)                                                                                                     gAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCgg                                           >  1:866751/1‑150 (MQ=255)                                                                                                          ggtTGGGCATGGCAAGGATGTGTGGTGGATTTGAGGGAGAAGGCTTTGGCACGCCCGCTTCCACAGGTATAGGTAC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTg                                      <  1:758913/150‑1 (MQ=37)                                                                                                              gggCATGGCAAGGATGTGTGGTGGTTTTGCGGCCCTCTTCGCGTGCACGCCCGCTCGCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTggcag                                  <  2:873835/150‑1 (MQ=255)                                                                                                               ggCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTggcagg                                 >  1:546020/1‑150 (MQ=255)                                                                                                                 cATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTggcag                                  >  2:5766/1‑147 (MQ=255)                                                                                                                 cATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTggcag                                  <  1:5766/147‑1 (MQ=255)                                                                                                                  aTGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTacac                                                                                          >  2:930014/1‑90 (MQ=255)                                                                                                                  aTGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTacac                                                                                          <  1:930014/90‑1 (MQ=255)                                                                                                                    ggCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATcc                            <  1:1417/150‑1 (MQ=255)                                                                                                                     gCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCtgt                                                                                      >  2:904318/1‑91 (MQ=255)                                                                                                                     gCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCtgt                                                                                      <  1:904318/91‑1 (MQ=255)                                                                                                                         aaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTac                                                                                            <  1:234225‑M1/56‑1 (MQ=255)                                                                                                                         aaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTac                                                                                            >  2:234225‑M1/26‑81 (MQ=255)                                                                                                                              cgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCtgt                                                                                      <  1:358643‑M1/62‑1 (MQ=255)                                                                                                                              cgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCtgt                                                                                      >  2:358643‑M1/21‑82 (MQ=255)                                                                                                                                     gtTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCA‑ACATTCAAGGTTGGCGCTACACCTGTGGGCGCGGGCGTGCCCGCAAAGCAATGAGTGAGGGTTCAGGGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTc           <  1:811208/150‑1 (MQ=37)                                                                                                                                      ttttGAGGGCCTCTTCGCGGGCACGCCCGCTCCGACATGTATAGCGCC‑ACATTCAATGTTGGCACTACACTTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCATTGAGGTCTCATCGGCCTTGGCAGGCAGCCACGCGCAAGCAGAGCTcc          >  2:436224/1‑150 (MQ=37)                                                                                                                                      ttttGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAg                                                     >  1:956935/1‑107 (MQ=255)                                                                                                                                      ttttGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAg                                                     <  2:956935/107‑1 (MQ=255)                                                                                                                                              gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCtt  <  2:546020/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCC‑ACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTT  >  NC_002947/337639‑337929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.