New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6098324 =24 (0.570)46 (1.190) 40/244 0.1 67.2% coding (821/867 nt) PP_5350 RpiR family transcriptional regulator
?NC_002947 = 6098314 23 (0.600)coding (831/867 nt) PP_5350 RpiR family transcriptional regulator

TACCGGCCTCTTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCAT  >  NC_002947/6098165‑6098462
                                                                                                                                                     |                                                                                                                                                    
tACCGGCCTCTTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGa                                                                                                                                                      >  1:193526/1‑150 (MQ=255)
tACCGGCCTCTTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGCTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGa                                                                                                                                                      >  2:771987/1‑150 (MQ=255)
 aCCGGCCTCTTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAc                                                                                                                                                     >  1:674414‑M2/1‑149 (MQ=255)
  ccGGCCTCTTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcg                                                                                                                                                    <  2:332807‑M2/150‑3 (MQ=255)
  ccGGCCTCTTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcg                                                                                                                                                    <  1:955378‑M2/150‑3 (MQ=255)
   cGGCCTCTTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgc                                                                                                                                                   >  1:24105‑M2/1‑147 (MQ=255)
     gCCTCTTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaa                                                                                                                                                 >  2:298908‑M2/1‑145 (MQ=255)
     gCCTCTTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaa                                                                                                                                                 <  1:480503‑M2/150‑6 (MQ=255)
     gCCTCTTCCGGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCACGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaa                                                                                                                                                 >  1:972825‑M2/1‑145 (MQ=255)
        tctTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagct                                                                                                                                              <  2:159009‑M2/150‑9 (MQ=255)
                 gCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcac                                                                                                                                     >  1:645781‑M2/1‑133 (MQ=255)
                   ttaccccGTTAACACTGGACGTACACCGATTTATAGAATTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACgcaagctgcgcaagctgc                                                                                                                                   <  1:492225/147‑1 (MQ=38)
                       cccGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaa                                                                                                                                                 >  2:401464‑M2/1‑127 (MQ=255)
                       cccGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaa                                                                                                                                                 <  1:401464‑M2/132‑6 (MQ=255)
                       cccGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGttt                                                                                                                               >  1:776768/1‑150 (MQ=255)
                        ccGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTc                                                                                                                              >  1:742932/1‑150 (MQ=255)
                             cacacaGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtg                                                                                                                         >  1:619708‑M2/1‑121 (MQ=255)
                              acacaGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCACGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtgg                                                                                                                        >  2:706939‑M2/1‑120 (MQ=255)
                                    gAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgacc                                                                                                                  <  2:920056‑M2/150‑37 (MQ=255)
                                      aTTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAggtg                                                                                                                <  2:742932/150‑1 (MQ=255)
                                           aCCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGa                                                                                                           >  2:1049864/1‑150 (MQ=255)
                                                  tataGAAGTGCACAGTACCTGTGGGAGCGGGACAGATCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcg                                                                                                    <  1:509487‑M2/150‑51 (MQ=255)
                                                   ataGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgc                                                                                                   <  2:310631‑M2/150‑52 (MQ=255)
                                                         gTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatg                                                                                             >  1:948804‑M2/1‑93 (MQ=255)
                                                          ttcacagtACCGGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatgg                                                                                            >  2:549645‑M2/3‑92 (MQ=255)
                                                             acaGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaa                                                                                         >  1:550832‑M2/1‑89 (MQ=255)
                                                                 tACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCAt                                                                                     <  2:153801/150‑1 (MQ=255)
                                                                   ccTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgccca                                                                                   >  2:825180‑M2/1‑83 (MQ=255)
                                                                    cTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACATGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGctct                                                                                                                       >  2:401843/1‑113 (MQ=255)
                                                                    cTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACATGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGctct                                                                                                                       <  1:401843/113‑1 (MQ=255)
                                                                       tgGGAGCGGGCAAGCCCGCGAACAGGCCAGTACCGGTCAAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggc                                                                               >  2:509487‑M2/1‑79 (MQ=255)
                                                                       tgGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAAc                                                                               <  2:322190/150‑1 (MQ=255)
                                                                         ggAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAgg                                                                                                                  >  2:365035/1‑113 (MQ=255)
                                                                         ggAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAgg                                                                                                                  <  1:365035/113‑1 (MQ=255)
                                                                          gAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccag                                                                            <  2:257996‑M2/150‑75 (MQ=255)
                                                                          gAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgcaagc                                                                                                                                      <  2:83471/92‑1 (MQ=255)
                                                                          gAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgcaagc                                                                                                                                      >  1:83471/1‑92 (MQ=255)
                                                                               ggCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgt                                                                       >  2:193526‑M2/1‑71 (MQ=255)
                                                                               ggCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgt                                                                       >  2:352447‑M2/1‑71 (MQ=255)
                                                                               ggCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctattcaccagggttaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgt                                                                       <  2:552698‑M2/150‑80 (MQ=255)
                                                                                gCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcac                                                                         <  1:117416‑M2/147‑78 (MQ=255)
                                                                                gCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcac                                                                         >  2:117416‑M2/1‑70 (MQ=255)
                                                                                  aaGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcga                                                                    <  2:710501‑M2/150‑83 (MQ=255)
                                                                                      ccGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcac                                                                <  1:59664‑M2/150‑87 (MQ=255)
                                                                                              aGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggt                                                        <  2:85955‑M2/150‑95 (MQ=255)
                                                                                                gCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcctgcagttaccacgtcgatcaccaccaggtgg                                                      >  1:552698‑M2/1‑54 (MQ=255)
                                                                                                         ggTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgc                                             <  2:116539‑M2/150‑106 (MQ=255)
                                                                                                          gTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcac                                                                         <  2:849378‑M2/121‑78 (MQ=255)
                                                                                                          gTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcac                                                                         >  1:849378‑M2/1‑44 (MQ=255)
                                                                                                          gTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggc                                                                                                              <  2:312870‑M2/84‑41 (MQ=255)
                                                                                                          gTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggc                                                                                                              >  1:312870‑M2/1‑44 (MQ=255)
                                                                                                           ttGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcga                                           >  1:310631‑M2/1‑43 (MQ=255)
                                                                                                                ttCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATAc                                      >  2:926125/1‑150 (MQ=255)
                                                                                                                   aGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccgtggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtg                                   <  2:702961‑M2/150‑116 (MQ=255)
                                                                                                                    gtcgtcGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGa                                  <  1:926125/150‑1 (MQ=255)
                                                                                                                     tcgtcgGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAg                                 <  1:332807/150‑1 (MQ=255)
                                                                                                                      cgtcgGTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtgggg                                >  1:85955‑M2/1‑32 (MQ=255)
                                                                                                                          ggTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtggggtgta                            >  1:454679‑M2/1‑28 (MQ=255)
                                                                                                                          ggTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAg                            >  2:620062/1‑150 (MQ=255)
                                                                                                                           gTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtggggtgtag                           >  2:480503‑M2/1‑27 (MQ=255)
                                                                                                                           gTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatca                                                                 <  2:1020668‑M2/112‑86 (MQ=255)
                                                                                                                           gTAGCCTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatca                                                                 >  1:1020668‑M2/1‑27 (MQ=255)
                                                                                                                           gTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGt                           <  1:771987/150‑1 (MQ=255)
                                                                                                                                cTTGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgagctccaccaggtgggcaatacgcgaggtcagtggggtgtagatctc                      <  1:113962‑M2/150‑129 (MQ=255)
                                                                                                                                cTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGGACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTggggg                      >  2:758570/1‑149 (MQ=255)
                                                                                                                                cTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGgt                      >  2:295780/1‑150 (MQ=255)
                                                                                                                                 ttGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtggggtgtagatctcg                     >  2:853179‑M2/1‑21 (MQ=255)
                                                                                                                                 ttGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtggggtgtagatctcg                     >  1:159009‑M2/1‑21 (MQ=255)
                                                                                                                                 ttGATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtggggtgtagatctcg                     >  2:777302‑M2/1‑21 (MQ=255)
                                                                                                                                  tGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGgtgt                    <  2:376799/150‑1 (MQ=255)
                                                                                                                                   gATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtggggtgtagatctcggt                   >  1:1013879‑M2/1‑19 (MQ=255)
                                                                                                                                   gATCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtggggtgtagatctcggt                   >  2:888471‑M2/1‑19 (MQ=255)
                                                                                                                                     tCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggtt                                                                                                                      <  2:112049‑M2/49‑33 (MQ=255)
                                                                                                                                     tCGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggtt                                                                                                                      >  1:112049‑M2/1‑17 (MQ=255)
                                                                                                                                      cGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgagattacgaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtggggtgtagatctcggtgtc                <  1:865053‑M2/150‑135 (MQ=255)
                                                                                                                                      cGACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtggggtgtagatctcggtgtc                >  1:846461‑M2/1‑16 (MQ=255)
                                                                                                                                       gACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtc                                       >  1:401478‑M2/1‑15 (MQ=255)
                                                                                                                                       gACTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtc                                       <  2:401478‑M2/126‑112 (MQ=255)
                                                                                                                                         cTTGGGCGACAGAcgcaagctgcgtttcacgctcttcaggtggttgaccaggctaggcccgcgcgccatggcaacgcccatggccagcacgtcgatcaccaccaggtgggcaatacgcgaggtcagtggggtgtagatctcggtgtcttc             >  1:702961‑M2/1‑13 (MQ=255)
                                                                                                                                           tGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCgg           <  1:295780/150‑1 (MQ=255)
                                                                                                                                                    gACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTTAt  <  1:1049864/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TACCGGCCTCTTCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCAT  >  NC_002947/6098165‑6098462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.