New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 547717820 (0.390)10 (0.290) 9/184 2.9 38.6% intergenic (+43/+69) PP_4813/PP_4814 PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
?NC_002947 = 5477195 18 (0.510)intergenic (+60/+52) PP_4813/PP_4814 PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein

TGCCGCTGCGGGTGTGGTGGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAG  >  NC_002947/5477032‑5477327
                                                                                                                                                  |                                                                                                                                                     
tGCCGCTGCGGGTGTGGTGGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCAc                                                                                                                                                    >  2:299477/1‑150 (MQ=255)
 gCCGCTGCGGGTGTGGTGGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACg                                                                                                                                                   <  2:1064854/150‑1 (MQ=255)
  ccGCTGCGGGTGTGGTGGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACgg                                                                                                                                                  <  1:299477/150‑1 (MQ=255)
      tGCGGGTGTGGTGGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATc                                                                                                                                              <  1:1129725/150‑1 (MQ=255)
         gggTGTGGTGGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGc                                                                                                                                                      <  1:184589/139‑1 (MQ=255)
         gggTGTGGTGGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGc                                                                                                                                                      >  2:184589/1‑139 (MQ=255)
          ggTGTGGTGGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCgcgc                                                                                                                                          >  2:679516/1‑150 (MQ=255)
           gtgtGGTGGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTACACCCGCTCCTACGCACGGGATCGCGCt                                                                                                                                         <  1:803913/150‑1 (MQ=255)
             gtggtgGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTa                                                                                                                                       <  1:417592/150‑1 (MQ=255)
                  tgcTGTTGTTCCCGCCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGTTATCAATATTGATGTTGCCTGTGCCGGCNTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgta                                                                                                                                  >  1:599259‑M2/2‑146 (MQ=255)
                     tGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtagga                                                                                                                               <  1:303708‑M2/150‑8 (MQ=255)
                       gtgtTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagc                                                                                                                             <  1:460583‑M1/150‑27 (MQ=255)
                        tgtTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcg                                                                                                                            <  1:782428‑M1/150‑28 (MQ=255)
                         gtTGCCGGCATGCGTGGCGTTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCTGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgg                                                                                                                           >  1:679796‑M2/1‑139 (MQ=255)
                         gtTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgg                                                                                                                           >  1:477456‑M2/1‑139 (MQ=255)
                         gtTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgg                                                                                                                           >  1:802767‑M2/1‑139 (MQ=255)
                         gtTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgg                                                                                                                           >  2:620280‑M2/1‑139 (MQ=255)
                          ttGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcggg                                                                                                                          <  1:687148‑M1/150‑30 (MQ=255)
                          ttGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcggg                                                                                                                          >  2:303708‑M2/1‑138 (MQ=255)
                          tggccGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcggg                                                                                                                          >  1:375479‑M2/3‑138 (MQ=255)
                           tGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcgggt                                                                                                                         <  1:818296‑M1/150‑31 (MQ=255)
                             ccGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggttt                                                                                                                       >  2:922729‑M2/1‑135 (MQ=255)
                               ggCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttac                                                                                                                     >  2:461833‑M2/1‑133 (MQ=255)
                                gCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacc                                                                                                                    >  1:876439‑M2/1‑132 (MQ=255)
                                  aTGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgg                                                                                                                           <  2:1006771‑M2/141‑12 (MQ=255)
                                  aTGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgg                                                                                                                           >  1:1006771‑M2/1‑130 (MQ=255)
                                      gTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacccgcgaa                                                                                                              >  1:946495‑M2/1‑126 (MQ=255)
                                         gcgcTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacccgcgaatag                                                                                                           >  1:679516‑M2/1‑123 (MQ=255)
                                                        ttcGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcgg                                                                                                                           >  2:1262227‑M1/1‑91 (MQ=255)
                                                        ttcGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcgg                                                                                                                           <  1:1262227‑M1/119‑29 (MQ=255)
                                                              atgcatgcGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgt                                                                                                                                       <  2:547185‑M1/101‑17 (MQ=255)
                                                              atgcatgcGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgt                                                                                                                                       >  1:547185‑M1/1‑85 (MQ=255)
                                                                              aGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcgg                                                                                                                           >  1:820806‑M1/1‑69 (MQ=255)
                                                                              aGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcgg                                                                                                                           <  2:820806‑M1/97‑29 (MQ=255)
                                                                                                   atTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgg                                                                                                                           <  1:861708‑M2/76‑12 (MQ=255)
                                                                                                   atTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgg                                                                                                                           >  2:861708‑M2/1‑65 (MQ=255)
                                                                                                                        cTATTCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgc                            >  1:679516‑M1/1‑27 (MQ=255)
                                                                                                                        cTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGc                            >  2:478490/1‑150 (MQ=255)
                                                                                                                        cTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGc                            >  2:420798/1‑150 (MQ=255)
                                                                                                                           ttCGCGGGTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccac                         >  1:946495‑M1/1‑24 (MQ=255)
                                                                                                                                 ggTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgc                   >  1:876439‑M1/1‑18 (MQ=255)
                                                                                                                                  gTAAACCCGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgcc                  >  2:461833‑M1/1‑17 (MQ=255)
                                                                                                                                  gTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTcccc                                                                 >  1:430491/1‑103 (MQ=255)
                                                                                                                                  gTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTcccc                                                                 <  2:430491/103‑1 (MQ=255)
                                                                                                                                    aaaCCCGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccgg                >  2:922729‑M1/1‑15 (MQ=255)
                                                                                                                                      aCCCGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggca              <  1:818296‑M2/150‑121 (MQ=255)
                                                                                                                                      aCCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGa              >  2:213985/1‑150 (MQ=255)
                                                                                                                                      aCCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGa              >  1:372454/1‑150 (MQ=255)
                                                                                                                                       cccGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcca             >  1:375479‑M1/1‑12 (MQ=255)
                                                                                                                                       cccGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaa             >  2:303708‑M1/1‑12 (MQ=255)
                                                                                                                                       cccGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaa             <  1:687148‑M2/150‑122 (MQ=255)
                                                                                                                                        ccGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaac            >  2:620280‑M1/1‑11 (MQ=255)
                                                                                                                                        ccGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaac            >  1:477456‑M1/1‑11 (MQ=255)
                                                                                                                                        ccGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaac            >  1:802767‑M1/1‑11 (MQ=255)
                                                                                                                                        ccGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcat                     >  1:1006771‑M1/1‑11 (MQ=255)
                                                                                                                                        ccGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcat                     <  2:1006771‑M1/141‑131 (MQ=255)
                                                                                                                                        ccGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgataccagaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcaacgccacgcatgccggcaac            >  1:679796‑M1/1‑11 (MQ=255)
                                                                                                                                        ccGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaat                                                                                      >  2:861708‑M1/1‑11 (MQ=255)
                                                                                                                                        ccGCTCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaat                                                                                      <  1:861708‑M1/76‑66 (MQ=255)
                                                                                                                                        ccGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaa                                           >  2:1262227‑M2/1‑28 (MQ=255)
                                                                                                                                        ccGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaa                                           <  1:1262227‑M2/119‑92 (MQ=255)
                                                                                                                                        ccGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcct                                                                 >  1:820806‑M2/1‑28 (MQ=255)
                                                                                                                                        ccGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcct                                                                 <  2:820806‑M2/97‑70 (MQ=255)
                                                                                                                                        ccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTg                                         >  2:769644/1‑121 (MQ=255)
                                                                                                                                        ccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTg                                         <  1:769644/121‑1 (MQ=255)
                                                                                                                                         cGCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaaca           <  1:782428‑M2/150‑124 (MQ=255)
                                                                                                                                          gCTCCTACGCACGGGATCGCGCTTATcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaacac          <  1:460583‑M2/150‑125 (MQ=255)
                                                                                                                                            tCCTACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaacatcaatattgatacctgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatgccggcaacacca        <  1:303708‑M1/150‑144 (MQ=255)
                                                                                                                                              cTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATa                                                                                           >  2:54146/1‑65 (MQ=255)
                                                                                                                                              cTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATa                                                                                           <  1:54146/65‑1 (MQ=255)
                                                                                                                                               tACGataagcgcgatcccgtgcgtaggagcgggtttacccgcgaatangccggcacaggcaacatcaatattgataactgaccaacgcctgcggcaacgcatgcatggcgaagaacgccagcagcgccacgcatggcgggaacaacagca     >  1:599259‑M1/1‑4 (MQ=255)
                                                                                                                                                  gCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGAGAATAGGCCGACACAGCCAATACAGAACCATCATTCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTcag  >  1:1107639/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
TGCCGCTGCGGGTGTGGTGGCTGGTGTTGCCGGCATGCGTGGCGCTGCTGGCGTTCTTCGCCATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAG  >  NC_002947/5477032‑5477327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.