| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5201663 | 22 (0.490) | 8 (0.250) | 7/190 | 3.1 | 42.3% | intergenic (‑101/‑79) | PP_4582/PP_4583 | membrane protein/putative Peptidase |
| ? | NC_002947 | = 5201684 | 6 (0.190) | intergenic (‑122/‑58) | PP_4582/PP_4583 | membrane protein/putative Peptidase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CGGTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5201478‑5201663‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcctgtgccggcctcttcgcgggtaaacccgctccAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGACTACACCT < NC_002947/5201684‑5201541 CGGTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGCTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTT < 1:17418/150‑1 TGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGC < 1:941887/150‑1 AGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCT < 2:769205/150‑1 AGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGG < 1:1067663/150‑1 GCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAA < 1:221429/150‑1 TGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACC < 2:750101/137‑1 TGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACC > 1:750101/1‑137 TACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCT > 2:795569/1‑108 TACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCT < 1:795569/108‑1 AAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCC > 2:67755/1‑136 AAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCC < 1:67755/136‑1 GAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAG < 2:263728/150‑1 GAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTT > 1:26793/1‑90 GAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTT < 2:26793/90‑1 GTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTC < 1:647443/112‑1 GTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTC > 2:647443/1‑112 TTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGG < 1:22501/140‑1 TTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGG > 2:22501/1‑140 AGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGG < 1:659724/114‑1 AGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGAAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGG > 2:659724/1‑114 TTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGG < 2:422961/86‑1 TTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGG > 1:422961/1‑86 GCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATG > 1:883945/1‑150 GCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGACCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATG > 2:597491/1‑150 TCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGG > 2:1046437/1‑115 TCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGG < 1:1046437/115‑1 CGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGACCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAAC < 1:597491/150‑1 GTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGAC > 2:716404/1‑150 CCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGA < 2:268827/144‑1 CCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGA > 1:268827/1‑144 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGG > 2:1005811/1‑100 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGG < 1:1005811/100‑1 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAA > 2:577405/1‑86 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAA < 1:762785/86‑1 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAA < 1:577405/86‑1 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAA > 2:762785/1‑86 CGCTCCAACAGGGATCGCACCGAGGTAGGAGCGAATTGACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGAGCCCGGAGAAGTGGTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGACTACACCT > 1:661656/1‑150 CGGTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5201478‑5201663‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcctgtgccggcctcttcgcgggtaaacccgctccAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCATAGGCATCTCTTTGCCTGGCTTGCACGAACACCATGACCGAGAACGACTACACCT < NC_002947/5201684‑5201541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |