New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5201663	22 (0.490)	8 (0.250)	7/190	3.1	42.3%	intergenic (‑101/‑79)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	= 5201684	6 (0.190)					intergenic (‑122/‑58)	PP_4582/PP_4583	membrane protein/putative Peptidase
Rejected: Coverage evenness skew score above cutoff.

GCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACA  >  NC_002947/5201516‑5201812                                                                                                                                                    |                                                                                                                                                      gcTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTccaa                                                                                                                                                     <  1:221429/150‑3 (MQ=255)     ctcgggggtgtcgcgctgttgcagccaggcatacgggtcggtggcctggtcggcttgggcaatcgggggttggggcttggttggcattgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTc                                                                                                                                                 <  2:616998‑M1/43‑1 (MQ=255)             aaGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTcc                                                                                                                                                       <  1:67755/136‑1 (MQ=255)             aaGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTcc                                                                                                                                                       >  2:67755/1‑136 (MQ=255)              aGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATc                                                                                                                                        >  2:883945/1‑150 (MQ=255)                    aGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGtt                                                                                                                                  <  2:898329/150‑1 (MQ=255)                    aGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGtt                                                                                                                                  <  1:721979/150‑1 (MQ=255)                          aGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAACCACTTCTCCGGGCTCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTCAATTCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCg                                                                                                                            <  1:661656/150‑1 (MQ=255)                           agccaggcatacgggtcggtggcctggtcggcttgggcaatcgggggttggggcttggttggcattgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           >  1:86629‑M1/86‑150 (MQ=255)                            gccaggcatacgggtcggtggcctggtcggcttgggcaatcgggggttggggcttggttggcattgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCggg                                                                                                                          >  1:616998‑M1/85‑150 (MQ=255)                                 gcatacgggtcggtggcctggtcggcttgggcaatcgggggttggggcttggttggcattgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           <  2:577827‑M1/65‑1 (MQ=255)                                 gcatacgggtcggtggcctggtcggcttgggcaatcgggggttggggcttggttggcattgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           >  1:577827‑M1/80‑144 (MQ=255)                                 gTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTAc                                                                                                                     <  2:716404/150‑1 (MQ=255)                                  tCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCggg                                                                                                                          <  1:268827/144‑1 (MQ=255)                                  tCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCggg                                                                                                                          >  2:268827/1‑144 (MQ=255)                                    gTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGTCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCcg                                                                                                                  >  1:597491/1‑150 (MQ=255)                                            ggtggcctggtcggcttgggcaatcgggggttggggcttggttggcattgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAgg                                                                                                          >  2:774717‑M1/69‑150 (MQ=255)                                             cATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGTCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGc                                                                                                         <  2:597491/150‑1 (MQ=255)                                             cATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGc                                                                                                         <  1:883945/150‑1 (MQ=255)                                              tggcctggtcggcttgggcaatcgggggttggggcttggttggcattgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGcc                                                                                                        >  2:990025‑M1/67‑150 (MQ=255)                                                     gtcggcttgggcaatcgggggttggggcttggttggcattgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAg                                                                                                 >  1:703237‑M1/60‑150 (MQ=255)                                                             accAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGt                                                                                                                                   <  1:310689/107‑1 (MQ=255)                                                             accAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGt                                                                                                                                   >  2:310689/2‑108 (MQ=255)                                                                caatcgggggttggggcttggttggcattgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCggg                                                                                                                          >  2:891023‑M1/49‑114 (MQ=255)                                                                caatcgggggttggggcttggttggcattgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCggg                                                                                                                          <  1:891023‑M1/66‑1 (MQ=255)                                                                             ccTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           >  1:1005811/1‑100 (MQ=255)                                                                             ccTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           <  2:1005811/100‑1 (MQ=255)                                                                             ccTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAaga                                                                                                            >  1:1046437/1‑115 (MQ=255)                                                                             ccTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAaga                                                                                                            <  2:1046437/115‑1 (MQ=255)                                                                               tATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGa                                                                                                                                          >  2:940881/1‑83 (MQ=255)                                                                               tATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGa                                                                                                                                          <  1:940881/83‑1 (MQ=255)                                                                                          attgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGc                                                                                                     <  1:281021‑M1/87‑1 (MQ=255)                                                                                          attgaaggtctcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCGCGGTGCGATCCCTGTTGGAGCGGGTTTGCCCGCGAAGAGGCCGGc                                                                                                     >  2:281021‑M1/23‑109 (MQ=255)                                                                                           ttttCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           <  2:762785/86‑1 (MQ=255)                                                                                           ttttCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           >  1:762785/1‑86 (MQ=255)                                                                                           ttttCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           >  1:577405/1‑86 (MQ=255)                                                                                           ttttCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           <  2:577405/86‑1 (MQ=255)                                                                                                    tcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTAcc                                                                                                                    >  1:465101‑M1/13‑84 (MQ=255)                                                                                                    tcttgattggagTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTAcc                                                                                                                    <  2:465101‑M1/72‑1 (MQ=255)                                                                                                                    CTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGaa                                                                                                              <  1:443308‑M1/74‑1 (MQ=255)                                                                                                                    CTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGaa                                                                                                              >  2:443308‑M1/1‑74 (MQ=255)                                                                                                                    CTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCAGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCCACCCCCGAttgcccaaacctcc                                  <  2:421499‑M1/150‑7 (MQ=255)                                                                                                                          CGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCaa                                                                                   >  1:1139963‑M1/1‑95 (MQ=255)                                                                                                                          CGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCaa                                                                                   <  2:1139963‑M1/95‑1 (MQ=255)                                                                                                                              CTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCa                                                                         >  2:1018368‑M1/1‑101 (MQ=255)                                                                                                                              CTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCa                                                                         <  1:1018368‑M1/101‑1 (MQ=255)                                                                                                                               TCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           >  2:332361‑M1/1‑50 (MQ=255)                                                                                                                               TCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                                                                           <  1:332361‑M1/50‑1 (MQ=255)                                                                                                                                 TTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGAcc                     <  1:679227‑M1/150‑1 (MQ=255)                                                                                                                                        GTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGc              <  1:849259‑M1/150‑1 (MQ=255)                                                                                                                                           AACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGtt                                                                                                                        >  2:10079‑M1/1‑41 (MQ=255)                                                                                                                                           AACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGtt                                                                                                                        <  1:10079‑M1/41‑1 (MQ=255)                                                                                                                                             CCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGc         <  1:919098‑M1/150‑1 (MQ=255)                                                                                                                                              CCGCTCCTATCTCGGTGCGATCCCTGTTGGAGCGGGTGTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCt        <  2:1107494‑M1/150‑1 (MQ=255)                                                                                                                                              CCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCt        <  1:50430‑M1/150‑1 (MQ=255)                                                                                                                                               CGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTgg          <  2:445826‑M1/147‑1 (MQ=255)                                                                                                                                               CGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTgg          >  1:445826‑M1/1‑147 (MQ=255)                                                                                                                                                    CTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACa  <  2:112192‑M1/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACA  >  NC_002947/5201516‑5201812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.