New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1899260 =55 (1.220)11 (0.280) 10/234 3.0 21.6% intergenic (+288/‑232) PP_t18/PP_1703 tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
?NC_002947 1899320 = 31 (0.780)intergenic (+348/‑172) PP_t18/PP_1703 tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase

ACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCA  >  NC_002947/1899117‑1899400
                                                                                                                                                  |                                                                                                                                            
aaggcgccggctgccccggcatgctgatgcaagcggggcaacacggcgcctttgtcgtgaagtggtgagggctgtcgacgttgacagcccgggatgaggtagatcagcaatttatgggccagctataccggccctttcgcgggcatGccc                                                                                                                                           >  2:561516‑M1/147‑150 (MQ=255)
  cTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTcc                                                                                                                                      >  1:1128945/1‑150 (MQ=255)
   tCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTccc                                                                                                                                     >  2:292665/1‑150 (MQ=255)
    cAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCGGTGCAGGCCTCTTCGCGGGCACGCCCGCCCCca                                                                                                                                    >  2:1043970/1‑150 (MQ=255)
     aaccccGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCA‑‑‑TGAAAATTTCAGGCGGCAAAAAGCGCCTGGGAGCAGGAGGTCGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCcac                                                                                                                                   <  1:260330/147‑1 (MQ=255)
         gctgccccggcatgctgatgcaagcggggcaacacggcgcctttgtcgtgaagtggtgagggctgtcgacgttgacagcccgggatgaggtagatcagcaatttatgggccagctataccggccctttcgcgggcatGCCCGCTCCcaca                                                                                                                                  <  1:545686‑M1/13‑1 (MQ=255)
          ctgccccggcatgctgatgcaagcggggcaacacggcgcctttgtcgtgaagtggtgagggctgtcgacgttgacagcccgggatgaggtagatcagcaatttatgggccagctataccggccctttcgcgggcatGCCCGCTCCCACAg                                                                                                                                 >  1:490776‑M1/137‑150 (MQ=255)
           tgccccggcatgctgatgcaagcggggcaacacggcgcctttgtattgaagtggtgggggctgtcgacgttgacagcccgggatgaggtagatcagcaatttatggcccagctataccggccctttcgcgggcatGCCCGCTCCCACAgg                                                                                                                                >  2:416267‑M1/136‑150 (MQ=255)
              cTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTgc                                                                                                                          <  1:317947/150‑1 (MQ=255)
                      ccGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCt                                                                                                                  >  2:216042/1‑150 (MQ=255)
                        ggCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTTTAAGCCTCTTCTCGGGCATGCCCGATTCAACAGGTACTGCGCCCCCCTct                                                                                                                <  2:332579/150‑2 (MQ=255)
                              tcCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCtt                                                                                                          >  1:419916/1‑150 (MQ=255)
                               ccTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGTCCTTg                                                                                                         <  1:243611/150‑1 (MQ=255)
                               ccTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTg                                                                                                         <  2:514470/150‑1 (MQ=255)
                                cTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGc                                                                                                        >  1:343338/1‑150 (MQ=255)
                                cTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACCGCGCCGCCCTCAGGCCTTGc                                                                                                        <  2:510924/150‑1 (MQ=255)
                                cTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACCGCGCCGCCCTCAGGCCTTGc                                                                                                        >  1:510924/1‑150 (MQ=255)
                                 cggggcaacacggcgcctttgtcgtgaagtggtgagggctgtcgacgttgacagcccgggatgaggtagatcagcaatttatgggccagctataccggccctttcgcgggcatGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCtt                                                                                                          >  2:683774‑M1/114‑150 (MQ=255)
                                   ggACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGAACTGCGCCGCCCTCGGGCCTTGCGat                                                                                                     >  1:1003053/1‑150 (MQ=255)
                                       aTGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATcc                                                                                                 <  2:656199/150‑1 (MQ=255)
                                       aTGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATcc                                                                                                 <  2:13198/150‑1 (MQ=255)
                                            ggcgcctttgtcgtgaagtggtgagggctgtcgacgttgacagcccgggatgaggtagatcagcaatttatgggccagctataccggccctttcgcgggcatGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCt                                                                                               >  2:713091‑M1/103‑150 (MQ=255)
                                               gcctttgtcgtgaagtggtgagggctgtcgacgttgacagcccgggatgaggtagatcagcaatttatgggccagctataccggcctcttcgcgggcacGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCtgtg                                                                                            >  2:627279‑M1/100‑150 (MQ=255)
                                                   tGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCgg                                                                                     <  1:1028661/150‑1 (MQ=255)
                                                    gCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCggg                                                                                    <  1:224923/150‑1 (MQ=255)
                                                            tGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCcg                                                                            >  1:697756/1‑150 (MQ=255)
                                                               aaaTTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAAACTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCcgctc                                                                         <  1:300831/150‑3 (MQ=255)
                                                                gtgagggctgtcgacgttgacagcccgggatgaggtagatcagcaatttatgggccagctataccggccctttcgcgggcacGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCtgt                                                                                             <  2:179157‑M1/50‑1 (MQ=255)
                                                                gtgagggctgtcgacgttgacagcccgggatgaggtagatcagcaatttatgggccagctataccggccctttcgcgggcacGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCtgt                                                                                             >  1:179157‑M1/83‑132 (MQ=255)
                                                                      cccAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCtt                                                                                                          >  1:496956/1‑110 (MQ=255)
                                                                      cccAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCtt                                                                                                          <  2:496956/110‑1 (MQ=255)
                                                                      cccAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCtgt                                                                                             <  1:798095/123‑1 (MQ=255)
                                                                      cccAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCtgt                                                                                             >  2:798095/1‑123 (MQ=255)
                                                                         cAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCgg                                                                <  2:343338/150‑1 (MQ=255)
                                                                               gttgacagcccgggatgaggtagatcagcaatttatgggccagctataccggccctttcgcgggcatGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCtgt                                                                                             <  2:1056953‑M1/50‑1 (MQ=255)
                                                                               gttgacagcccgggatgaggtagatcagcaatttatgggccagctataccggccctttcgcgggcatGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCtgt                                                                                             >  1:1056953‑M1/68‑117 (MQ=255)
                                                                                  gcgcCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCt                                                         <  2:697756/150‑1 (MQ=255)
                                                                                     ccTGGGAGCATGAGGTTGGCACCGCATGGTGCGTAACCTGTGAAAGCNTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCAGGGAAAGGGGCGGTATAGCTGGc                                                      >  1:547235/1‑150 (MQ=38)
                                                                                       tGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCtg                                                                                              <  1:791288/108‑1 (MQ=255)
                                                                                       tGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCtg                                                                                              >  2:791288/1‑108 (MQ=255)
                                                                                                gAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGTCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGc                                           <  1:405587/150‑1 (MQ=255)
                                                                                                gAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCa                                                                                                                >  2:609199/1‑81 (MQ=255)
                                                                                                gAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCa                                                                                                                <  1:609199/81‑1 (MQ=255)
                                                                                                 aGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCt                                          <  2:269066/150‑1 (MQ=255)
                                                                                                   gTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATccc                                                                                                >  2:698298/1‑94 (MQ=255)
                                                                                                   gTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATccc                                                                                                <  1:698298/94‑1 (MQ=255)
                                                                                                   gTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGa                                        >  2:545686/1‑150 (MQ=255)
                                                                                                        cACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCAt                                                  >  1:608921/1‑135 (MQ=255)
                                                                                                        cACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCAt                                                  <  2:608921/135‑1 (MQ=255)
                                                                                                        cACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAc                                   >  1:558071/1‑150 (MQ=255)
                                                                                                        cACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAc                                   <  1:119310/150‑1 (MQ=255)
                                                                                                         agcaatttatgggccagctataccggccctttcgcgggcatGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATcc                                                                                                 <  2:619045‑M1/46‑1 (MQ=255)
                                                                                                         agcaatttatgggccagctataccggccctttcgcgggcatGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATcc                                                                                                 >  1:619045‑M1/42‑87 (MQ=255)
                                                                                                                  tGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCgg                         <  2:558071/150‑1 (MQ=255)
                                                                                                                  tGCCTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                 >  2:102169/1‑110 (MQ=255)
                                                                                                                  tGCCTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                 <  1:102169/110‑1 (MQ=255)
                                                                                                                    cGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATc                                                                                                  <  2:1021252/75‑1 (MQ=255)
                                                                                                                    cGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATc                                                                                                  >  1:1021252/1‑75 (MQ=255)
                                                                                                                       aaCCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCGCGCGAAGAAATCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGt                    >  1:359145/1‑150 (MQ=38)
                                                                                                                         gctataccggccctttcgcgggcatGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCg                                                                                      >  2:924461‑M1/26‑82 (MQ=255)
                                                                                                                         gctataccggccctttcgcgggcatGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCg                                                                                      <  1:924461‑M1/57‑1 (MQ=255)
                                                                                                                          cTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCaa                 >  1:213016/1‑150 (MQ=255)
                                                                                                                             tgCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGt              <  2:419916/150‑1 (MQ=255)
                                                                                                                                  gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACa         >  1:636534/1‑150 (MQ=255)
                                                                                                                                   ccTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAg        <  2:213016/150‑1 (MQ=255)
                                                                                                                                     tctTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTg                                            >  2:1104113/1‑112 (MQ=255)
                                                                                                                                     tctTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTg                                            <  1:1104113/112‑1 (MQ=255)
                                                                                                                                         cgcgGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTca  <  1:292665/150‑1 (MQ=255)
                                                                                                                                                aCGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCgg                         <  1:834134/120‑1 (MQ=255)
                                                                                                                                                aCGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCgg                         >  2:834134/1‑120 (MQ=255)
                                                                                                                                                  |                                                                                                                                            
ACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGC‑‑AAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCA  >  NC_002947/1899117‑1899400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.