New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 786605	33 (2.040)	3 (0.200)	3/234	NT	10.0%	intergenic (+24/‑281)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
	?	NC_002947	= 786691	24 (1.620)					intergenic (+110/‑195)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor

CCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/786545‑786605 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggccTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGCCGAAGAGACTCAGACGTGACGCTGTTTGGCCTTGCCCCG  <  NC_002947/786691‑786552                                                                                                                                                                                                           CCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGC                                                     >  2:19425/1‑150  cgGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCC                                                    <  1:43258/148‑1             CAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGC                                         <  1:19425/150‑1                                                    TGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGCCGAAGAGACTCAGACGTGACGCTGTTTGGCCTTGCCCCG  >  2:342778/1‑150                                                                                                                                                                                                           CCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/786545‑786605 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggccTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGCCGAAGAGACTCAGACGTGACGCTGTTTGGCCTTGCCCCG  <  NC_002947/786691‑786552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.