New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 786605	33 (2.040)	3 (0.200)	3/234	NT	10.0%	intergenic (+24/‑281)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
	?	NC_002947	= 786691	24 (1.620)					intergenic (+110/‑195)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor

CCGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCC  >  NC_002947/786460‑786752                                                                                                                                                   |                                                                                                                                                    ccGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCttt                                                                                                                                                 >  2:248755/1‑150 (MQ=255)    agcagcAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTcgc                                                                                                                                              <  1:76291/150‑1 (MQ=255)             cTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGcc                                                                                                                                     <  1:248755/150‑1 (MQ=255)                cccGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGc                                                                                                                                  >  2:284682/1‑150 (MQ=255)                  cGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTc                                                                                                                                <  1:32449/150‑1 (MQ=255)                   gCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGCGCCTCACG‑CGAGCAGCGGCACGTCTGAGTCTCTTTGGATGGTGTGTTCGCCCTTTCGCGGGCTCGCCCGCTcc                                                                                                                               >  1:342778/1‑150 (MQ=255)                           ggcTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGGCCGCTCCCCCAGGaa                                                                                                                       >  2:116588/1‑150 (MQ=255)                               tCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATcgc                                                                                                                   <  2:281356/150‑1 (MQ=255)                                cAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATcgcg                                                                                                                  <  1:292284/150‑1 (MQ=255)                                  gCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCTGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGa                                                                                                                <  1:284735/150‑1 (MQ=255)                                   cGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGAt                                                                                                               >  2:245074/1‑150 (MQ=255)                                                   gCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTgtgg                                                                                               <  1:228799/150‑1 (MQ=255)                                                   gCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTgtgg                                                                                               <  1:97559/150‑1 (MQ=255)                                                                       gggCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTgg                                                                                    <  2:114196/141‑1 (MQ=255)                                                                       gggCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTgg                                                                                    >  1:114196/1‑141 (MQ=255)                                                                         gCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCACGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATg                                                                         >  1:231389/1‑150 (MQ=255)                                                                                ttGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGa                                                                  >  2:316367/1‑150 (MQ=255)                                                                                   ccgccTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAaga                                                               <  1:245698/150‑1 (MQ=255)                                                                                   ccgccTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAaga                                                               <  1:284682/150‑1 (MQ=255)                                                                                   ccgccTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAaga                                                               <  2:264583/150‑1 (MQ=255)                                                                                      ccTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCtcttcgcgggcatgcccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggc                                                            >  2:19425‑M1/1‑61 (MQ=255)                                                                                       cggccGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCtcttcgcgggcatgcccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggcc                                                           <  1:43258‑M1/148‑91 (MQ=255)                                                                                             cgGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAggccggcaca                                                     >  2:342778‑M2/1‑140 (MQ=255)                                                                                                  c‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCtcttcgcgggcatgcccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggccggcacagcagc                                                <  1:19425‑M1/150‑102 (MQ=255)                                                                                                     aGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGctct                                                                                                   <  1:321488/97‑1 (MQ=255)                                                                                                     aGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGctct                                                                                                   >  2:321488/1‑97 (MQ=255)                                                                                                        ccAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGACTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAAt                                           >  2:170536/1‑150 (MQ=255)                                                                                                           aaCAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCa                                        <  1:116588/150‑1 (MQ=255)                                                                                                                  tCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAAt                                           <  2:159846/140‑1 (MQ=255)                                                                                                                  tCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAAt                                           >  1:159846/1‑140 (MQ=255)                                                                                                                  tCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGt                                 >  1:386401/1‑150 (MQ=255)                                                                                                                          gAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCAc                         <  1:170536/150‑1 (MQ=255)                                                                                                                                ctTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAAAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATca                   <  1:316367/150‑1 (MQ=255)                                                                                                                                    ggCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACAcc               <  1:245074/150‑1 (MQ=255)                                                                                                                                     gctgctGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAggccggcacagcagccgaagagactcagacgtgacgctgtttggccttg              <  1:19425‑M2/150‑50 (MQ=255)                                                                                                                                     gctgctGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTAATCACAccc              >  1:141197/1‑150 (MQ=255)                                                                                                                                      ctgctgTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAAt                                               <  1:308716/116‑1 (MQ=255)                                                                                                                                      ctgctgTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAAt                                               >  2:308716/1‑116 (MQ=255)                                                                                                                                          tgtgCCGGCCtcttcgcgggcatgcccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggccggcacagcagccgaagagactcagacgtgacgctgtttggccttgccccg         >  2:342778‑M1/1‑10 (MQ=255)                                                                                                                                            tgCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATc       >  2:284029/1‑150 (MQ=255)                                                                                                                                                ggCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAggccggcacagcagccgaagagactcagacgtgacgctgtttggccttgccccgcggccg   <  1:43258‑M2/150‑61 (MQ=255)                                                                                                                                                 gCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAggccggcacagcagccgaagagactcagacgtgacgctgtttggccttgccccgcggcagg  >  2:19425‑M2/1‑89 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CCGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGC‑AAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCC  >  NC_002947/786460‑786752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.