New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1758576 =	8 (0.490)	3 (0.200)	3/238	NT	24.6%	coding (1590/1686 nt)	PP_1563	terminase large subunit
	?	NC_002947	1758613 =	11 (0.730)					coding (1627/1686 nt)	PP_1563	terminase large subunit

CAAACCGCCGGCGGCAAGCACCAGAAAGATGATCAGGCCAGTTTTCATAGGTTTTCCCGTTAGCCAACCACGATCGGGCTGGCAAGAAAGTCATCGAAGTGGCCGGAGTCGTCGATACCGAGCTTGATGGCC‑ACGGCGCAGCCGGTGATCAAGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1758731‑1758576 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaagctcGGTATCGACGACTCCGGCCACTTCGATGACTTTCTTGCCAGCCCGATCGTGGTTGGCTAACGGGAAAACCTATGAAAACTGGCCTGATCATCTTTCTGGTGCTT  >  NC_002947/1758613‑1758716                                                                                                                                                                                                                                                                       CAAACCGCCGGCGGCAAGCACCAGAAAGATGATCATGGCAGTTTTCATAGGTTTTCCCGTTAGGCAACAACGATCGGGCTGGCAAGAAAGTCATCGAAGTGGCCGGAGTCGTCGATACCGAGCTTGATGGCC‑ACGGCGCAGCCGGTGATC                                                                                                                <  2:327981/150‑1  AAACCGCCGGCGGCAAGCACCAGAAAGATGATCAGGCGAGTTTTCATAGGTTTTCCCGTTAGCCAACCACGATCGGGCTGGCTAGAAAGTCATCGAAGTGGCCGGAGTCGTGGATACCGAGCTTGATGGCC‑ACGGCGCAGCCTGTGATCA                                                                                                               >  1:172021/1‑150                       AGAAAGATGATCAGGCCAGTTTTCATAGGTTTTCCCGTTAGCCAACCACGATCGGGCTGGCAAGAAAGTCATCGAAGTGGCCGGAGTCGTCGATACCGAGCTTGATCACCGGCTGCGCCG‑TGGCCATCAAGCTCGGTATCGACGACTCCG                                                                                          <  1:236404/150‑1                                                                                                                       CGAGCTTGATGGCC‑ACGGCGCAGCCGGTGATCAAGCTCGGTATCGACGACTCCGGCCACTTCGATGACTTTCTTGCCAGCCCGATCGTGGTTGGCTAACGGGAAAACCTATGAAAACTGGCCTGATCATCTTTCTGGTGCTT  >  2:113025/1‑142                                                                                                                       CGAGCTTGATGGCC‑ACGGCACAGCCGGTGATCAAGCTCGGTATCGACGACTCCGGCCACTTCGATGACTTTCTTGCCAGCCCGATCGTGGTTGGCTAACGGGAAAACCTATGAAAACTGGCCTGATCATCTTTCTGGTGCTT  <  1:113025/142‑1                                                                                                                                                                                                                                                                       CAAACCGCCGGCGGCAAGCACCAGAAAGATGATCAGGCCAGTTTTCATAGGTTTTCCCGTTAGCCAACCACGATCGGGCTGGCAAGAAAGTCATCGAAGTGGCCGGAGTCGTCGATACCGAGCTTGATGGCC‑ACGGCGCAGCCGGTGATCAAGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1758731‑1758576 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaagctcGGTATCGACGACTCCGGCCACTTCGATGACTTTCTTGCCAGCCCGATCGTGGTTGGCTAACGGGAAAACCTATGAAAACTGGCCTGATCATCTTTCTGGTGCTT  >  NC_002947/1758613‑1758716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.