New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3724527 =	11 (0.680)	3 (0.200)	3/242	NT	22.7%	coding (54/927 nt)	PP_3290	universal stress protein family protein
	?	NC_002947	3724571 =	10 (0.650)					coding (98/927 nt)	PP_3290	universal stress protein family protein

CTGAGCGCGATAATGCTGGTACTGGCGCTTGATATCGGCCTCGTTCAGCCGCTCTTCGCGCAGAAGGTGCTCCTCGCTTGGCTCGAACAAGCCCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3724680‑3724527 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggcgCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCA  >  NC_002947/3724571‑3724658                                                                                                                                                                                                                                                    CTGAGCGCGATAATGCTGGTACTGGCGCTTGATATCGGCCTCGTTCAGCCGCTCTTCGCGCAGAAGGTGCTCCTCGCTTGGCTCGAACAAGCCCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGC                                                                                              <  2:154385/150‑1                                                                                             CCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCA  >  1:114980/1‑150                                                                                                  ACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATC          <  1:259376/137‑1                                                                                                  ACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCGCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATC          >  2:259376/1‑137                                                                                                                                                                                                                                                    CTGAGCGCGATAATGCTGGTACTGGCGCTTGATATCGGCCTCGTTCAGCCGCTCTTCGCGCAGAAGGTGCTCCTCGCTTGGCTCGAACAAGCCCAGCACATGCACGCTGGCGCCGCTGACTTGCGCCAAGGCAAGGGCTCGGCGCAAAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3724680‑3724527 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggcgCCAGCGTGCATGTGCTGGGCTTGTTCGAGCCAAGCGAGGAGCACCTTCTGCGCGAAGAGCGGCTGAACGAGGCCGATATCAAGCGCCA  >  NC_002947/3724571‑3724658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.