| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5823672 | 18 (1.110) | 3 (0.190) | 3/248 | NT | 15.6% | coding (552/1176 nt) | yggW | coproporphyrinogen/heterocyclic compound oxidase |
| ? | NC_002947 | = 5823707 | 15 (0.960) | coding (587/1176 nt) | yggW | coproporphyrinogen/heterocyclic compound oxidase | |||||
CTTTCAGCCAGCCAAGCTGGAGGCACTGGGGCGCATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGAT > NC_002947/5823537‑5823813 | cTTTCAGCCAGCCAAGCTGGAGGCACTGGGGCGCATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCt > 2:442940/1‑150 (MQ=255) gccagccaAGCTGGAGGCACTGGGGCGCATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCTCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTgc > 2:110146/1‑149 (MQ=255) caAGCTGGAGGCACTGGGGCGCATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGAc < 2:420253/145‑1 (MQ=255) caAGCTGGAGGCACTGGGGCGCATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGAc > 1:420253/1‑145 (MQ=255) gcgcATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGatggcctggcgcaggtcacccagcgcgtcgtccagcgactggtc < 2:20504‑M1/150‑45 (MQ=255) gcATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAACTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGc < 2:29852/150‑1 (MQ=255) aTCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTggg < 1:21196/119‑1 (MQ=255) aTCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTggg > 2:21196/1‑119 (MQ=255) tCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGa < 2:21128/150‑1 (MQ=255) tGGCGACGAAGCGGGTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCt < 2:75211/150‑1 (MQ=255) ccgccgGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGatggcctggcgcaggtcacccagcgcgtcgtccagc < 1:390042‑M1/110‑37 (MQ=255) ccgccgGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGatggcctggcgcaggtcacccagcgcgtcgtccagc > 2:390042‑M1/1‑74 (MQ=255) cgccgGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGt < 2:379040/150‑1 (MQ=255) gTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGa > 1:93233/1‑150 (MQ=255) ttCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCa < 1:106993/150‑1 (MQ=255) tCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCag > 1:302562/1‑150 (MQ=255) gCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACTTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAgacga > 2:106768/1‑150 (MQ=255) cACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAgacgac < 1:75944/150‑1 (MQ=255) cACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAgacgac < 2:302562/150‑1 (MQ=255) tGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCctct < 1:442940/150‑1 (MQ=255) cccGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTgg > 1:287936/1‑150 (MQ=255) gACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATcgactggtcgggcaggccgtgcatcaggtccatgttgaaattgtcgaaaccggccgcgcgcgccatgccggcggctcgaaccgcttcgtcgccattgtggatgcgc < 2:20504‑M2/150‑107 (MQ=255) gCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATcgactggtcgggcaggccgtgcatcaggtccatgttgaaattgtcgaaaccggccgcgcgcgccatgccggcgg < 1:390042‑M2/110‑75 (MQ=255) gCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATcgactggtcgggcaggccgtgcatcaggtccatgttgaaattgtcgaaaccggccgcgcgcgccatgccggcgg > 2:390042‑M2/1‑36 (MQ=255) | CTTTCAGCCAGCCAAGCTGGAGGCACTGGGGCGCATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGAT > NC_002947/5823537‑5823813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |