New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5823672	18 (1.110)	3 (0.190)	3/248	NT	15.6%	coding (552/1176 nt)	yggW	coproporphyrinogen/heterocyclic compound oxidase
	?	NC_002947	= 5823707	15 (0.960)					coding (587/1176 nt)	yggW	coproporphyrinogen/heterocyclic compound oxidase

GCATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGATATTCAGGAAGCCGGCCAAGCGCTGATGGCC  >  NC_002947/5823569‑5823843                                                                                                                                           |                                                                                                                                         gcATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAACTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGc                                                                                                                               <  2:29852/150‑1 (MQ=255)    tCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGa                                                                                                                            <  2:21128/150‑1 (MQ=255)           tGGCGACGAAGCGGGTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCt                                                                                                                     <  2:75211/150‑1 (MQ=255)                                cgccgGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGt                                                                                                <  2:379040/150‑1 (MQ=255)                                                       gTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGa                                                                         >  1:93233/1‑150 (MQ=255)                                                                  ttCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCa                                                              <  1:106993/150‑1 (MQ=255)                                                                   tCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCag                                                             >  1:302562/1‑150 (MQ=255)                                                                                   gCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACTTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAgacga                                             >  2:106768/1‑150 (MQ=255)                                                                                    cACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAgacgac                                            <  1:75944/150‑1 (MQ=255)                                                                                    cACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAgacgac                                            <  2:302562/150‑1 (MQ=255)                                                                                           tGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCctct                                     <  1:442940/150‑1 (MQ=255)                                                                                             cccGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTgg                                   >  1:287936/1‑150 (MQ=255)                                                                                                gACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATcgactggtcgggcaggccgtgcatcaggtccatgttgaaattgtcgaaaccggccgcgcgcgccatgccggcggctcgaaccgcttcgtcgccattgtggatgcgc                                <  2:20504‑M2/150‑107 (MQ=255)                                                                                                        gCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATcgactggtcgggcaggccgtgcatcaggtccatgttgaaattgtcgaaaccggccgcgcgcgccatgccggcgg                                                                <  1:390042‑M2/110‑75 (MQ=255)                                                                                                        gCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATcgactggtcgggcaggccgtgcatcaggtccatgttgaaattgtcgaaaccggccgcgcgcgccatgccggcgg                                                                >  2:390042‑M2/1‑36 (MQ=255)                                                                                                                           gACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGATATTCAGGAAGCCGGCCAAGCGCTGATg     <  1:336782/150‑1 (MQ=255)                                                                                                                            aCCTGCGCCAGGCCATCGACCTGGGGCCGACCCACTTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGATATTCAGGAAGCCGGCCAAGCGCTGATgg    <  1:106768/150‑1 (MQ=255)                                                                                                                              cTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGATATTCAGGAAGCCGGCCAAGCACTGATGGcc  >  1:119981/1‑150 (MQ=255)                                                                                                                                           |                                                                                                                                         GCATCCACAATGGCGACGAAGCGGTTCGAGCCGCCGGCATGGCGCGCGCGGCCGGTTTCGACAATTTCAACATGGACCTGATGCACGGCCTGCCCGACCAGTCGCTGGACGACGCGCTGGGTGACCTGCGCCAGGCCATCGACCTGGGGCCGACCCACCTGTCGTGGTATCAGCTGACCGTGGAACCGAACACGGTGTTCTGGAACCAGCCGCCAGAGCTGCCCGAAGACGACATCCTCTGGGATATTCAGGAAGCCGGCCAAGCGCTGATGGCC  >  NC_002947/5823569‑5823843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.