New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1194573 =	13 (0.800)	3 (0.190)	3/250	NT	18.9%	coding (706/1653 nt)	uxpA	lipoprotein UxpA
	?	NC_002947	1194616 =	13 (0.820)					coding (749/1653 nt)	uxpA	lipoprotein UxpA

CTGCACGTTTTCGAGCGCGGCGGTGCCCGTATTGCAGTGGTTGGCGTGACCGACCCGTACGCCCAGGATCAGAAAGCCTCACTCAAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGCCCGTGGTCAGGACCTGTGGCCCGCACCGGTCGAGGCCACCCAGGCCAGCGGTCGGC  >  NC_002947/1194477‑1194759                                                                                                                                            |                                                                                                                                                taccacgcgcccacgacagcacgtcgatttccggcccccgttcagccagccacaggccgggtcccgtgcctgcatcggccatggccaccaccaggtTAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCtggtggtg                                                                                                                                       >  2:168816‑M1/97‑150 (MQ=255)    cacgggcgcacaacagcacgtcgatttgcggcacccgttcagccagccacaggccggggcccgtgcctgcatcggccatggccaccaccaggtCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCtggtg                                                                                                                                          <  1:256334‑M1/51‑1 (MQ=255)    cacgggcgcacaacagcacgtcgatttgcggcacccgttcagccagccacaggccggggcccgtgcctgcatcggccatggccaccaccaggtCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCtggtg                                                                                                                                          >  2:256334‑M1/94‑144 (MQ=255)       gTTTTCGAGCGCGGCGGTGCCCGTATTGCAGTGGTTGGCGTGACCGACCCGTACGCCCAGGATCAGAAAGCCTCACTCAAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATg                                                                                                                                 <  2:320997/150‑1 (MQ=255)                                              gTGACCGACCCGTACGCCCAGGATCAGAAAGCCTCACTCAAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCtggtggtg                                                                                                                                       >  1:316688/1‑105 (MQ=255)                                              gTGACCGACCCGTACGCCCAGGATCAGAAAGCCTCACTCAAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCtggtggtg                                                                                                                                       <  2:316688/105‑1 (MQ=255)                                                               ccAGGATCAGAAAGCCTCACTCAAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGa                                                                         >  2:127454/1‑150 (MQ=255)                                                                aaGGATCAGAAAGCCTCACTCAAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGAc                                                                        <  1:426961/149‑1 (MQ=255)                                                                        gAAAGCCTCACTCAAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCtgtt                                                                >  1:69183/1‑150 (MQ=255)                                                                               tcactcaAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGc                                                                                                         <  2:389849/102‑1 (MQ=255)                                                                               tcactcaAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGc                                                                                                         >  1:389849/1‑102 (MQ=255)                                                                               tcactcaAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGcc                                                         >  1:149505/1‑150 (MQ=255)                                                                                   tcaAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTCCTGTTGTGCGCCCGTg                                                     >  2:344605/1‑150 (MQ=255)                                                                                      caccaccaggtcagcctcgtgccgggcttgctcgaataccggcagcagagactaACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGACCCGGCCTGTGGCTGGCTGAACGGGGGCCGGAAATCGACGTGCTGTCGTGGGCGCGTGgta                                                  >  2:168816‑M2/55‑149 (MQ=255)                                                                                         caccaggtcagcctcgtgccgggcttgctcgaataccggcagcagagactgACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGCCCGTg                                                     >  2:256334‑M2/52‑144 (MQ=255)                                                                                         caccaggtcagcctcgtgccgggcttgctcgaataccggcagcagagactgACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGCCCGTg                                                     <  1:256334‑M2/93‑1 (MQ=255)                                                                                              tACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGCCCGTGGTCAGGACCtg                                          >  2:442462/1‑150 (MQ=255)                                                                                                 CAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGCCCGTGGTCAGGACCTGTgg                                       >  2:69183‑M1/1‑150 (MQ=255)                                                                                                                gTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGCCCGTGGTCAGGACCTGTGGCCCGCACCGGTCGAg                        <  2:309484/150‑1 (MQ=255)                                                                                                                                   aCGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGCCCGTGGTCAGGACCTGTGGCCCGCACCGGTCGAGGCCACCCAGGCCAGCGGTc     >  1:134176/1‑150 (MQ=255)                                                                                                                                     gAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGCCCGTGGTCAGGACCTGTGGCCCGCACCGGTCGAGGCCACCCAGGCCAGCGGTCgg   >  1:154973/1‑150 (MQ=255)                                                                                                                                      aGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGCCCGTGGTCAGGACCTGTGGCCCGCACCGGTCGAGGCCACCCAGGCCAGCGGTCGgc  >  2:312376/1‑150 (MQ=255)                                                                                                                                            |                                                                                                                                                CTGCACGTTTTCGAGCGCGGCGGTGCCCGTATTGCAGTGGTTGGCGTGACCGACCCGTACGCCCAGGATCAGAAAGCCTCACTCAAACAGTGGTACCAGTCTCTGCTGCCGGTATTCGAGCAAGCCCGGCACGAGGCTGACCTGGTGGTGGCCATGGCCGATGCAGGCACGGGCCCCGGCCTGTGGCTGGCTGAACGGGTGCCGCAAATCGACGTGCTGTTGTGCGCCCGTGGTCAGGACCTGTGGCCCGCACCGGTCGAGGCCACCCAGGCCAGCGGTCGGC  >  NC_002947/1194477‑1194759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.