New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1967188 =	40 (0.630)	11 (0.230)	10/208	4.0	23.1%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967284 =	43 (0.890)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
Rejected: Coverage evenness skew score above cutoff.

GCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCATCG  >  NC_002947/1967152‑1967425                                                                                                                                     |                                                                                                                                              gccggcGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGc                                                                                                                               <  1:930930/149‑1 (MQ=255) gccggcGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGc                                                                                                                               >  2:930930/1‑149 (MQ=255)                  gCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGTAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGtt                                                                                                             <  1:200119/150‑1 (MQ=255)                  gCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGt                                                                                                                                        <  1:465004/123‑1 (MQ=255)                  gCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGt                                                                                                                                        >  2:465004/1‑123 (MQ=255)                    tGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACGGGATCGCCGCAACCCTCAAGGATTGCCCCCTGCCTGTGGGAGCGGGCAAGCCCGGGAAGAGGCCGCGGCAGGGTTATTGGGCGTTGAACGCCTGCCCGTTcc                                                                                                           >  2:30809/1‑149 (MQ=38)                        cGCTTTCCTGTACCGGCCTCTTCGCGGGATTGCCCGCTCCCACAAGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTTTGGGGGCGTGGCAGCCCGCCAAGAGGCCGACGCAGGTTTCTTGGGCGGTGAACGCCTGACCGGTCAcccc                                                                                                       >  2:318538/1‑150 (MQ=255)                                          tctTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCAt                                                                                     >  1:760196/1‑150 (MQ=255)                                            ttCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATca                                                                                   >  1:1434241/1‑150 (MQ=255)                                            ttCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGCGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcc                                                                                   >  2:1132045/1‑149 (MQ=255)                                                cgGGCTTCCCCGCTCCCAAAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGGGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggta                                                                               <  1:688909/150‑1 (MQ=255)                                                   gCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCGCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacag                                                                            <  1:1236631/150‑1 (MQ=255)                                                   gCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGAGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGc                                                                                                                      >  2:1292576/1‑108 (MQ=255)                                                   gCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGc                                                                                                                      <  1:1292576/108‑1 (MQ=255)                                                     ttcccgtcTCCCCAAGGATCACCGCACCCCTCAAGGATTGCGCCCTGACTGCGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacaggt                                                                          <  1:318538/143‑1 (MQ=255)                                                         ccGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTacac                                                                      >  1:697516/1‑150 (MQ=255)                                                            cTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCgg                                                                   <  2:697516/150‑1 (MQ=255)                                                             tCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCGTGTGGGAGCGGGCACGCCCGCGAAGCGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTTTGCTGTCCGGCCCCATCAGTTACAGGTACACCGGc                                                                  <  2:941839/150‑1 (MQ=255)                                                               ccACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacagg                                                                           <  1:155209/139‑1 (MQ=255)                                                               ccACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacagg                                                                           >  2:155209/1‑139 (MQ=255)                                                               ccACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCAt                                                                >  1:285885/1‑150 (MQ=255)                                                                cacaGGATCAGCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGTAGCGGGCAAGCCCGCGAAGAGGCCGATGAAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATg                                                               >  2:610689/1‑150 (MQ=255)                                                                 ccaGGATCACCGCAACCCTCAAGGATTCCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa                                                              <  1:30809/149‑1 (MQ=255)                                                                          ccGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCgg                                                     >  2:150638/1‑150 (MQ=255)                                                                           cGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGtt                                                                                                                            >  2:649472/1‑78 (MQ=255)                                                                           cGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGtt                                                                                                                            <  1:649472/78‑1 (MQ=255)                                                                            gCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCgggg                                                   >  2:769175/1‑149 (MQ=255)                                                                                  cTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGTAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCt                                                                                                 >  2:979494/1‑98 (MQ=255)                                                                                  cTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCtgtg                                                                                                   <  2:347953/96‑1 (MQ=255)                                                                                  cTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCt                                                                                                 <  1:979494/98‑1 (MQ=255)                                                                                  cTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACACCtgtg                                                                                                   >  1:347953/1‑96 (MQ=255)                                                                                   tCAAGGCATGCGCCCTGCCTGTGGGACCGGGCAAGCGCGCGAAGAGGCCGATGCAGGTTTATTGGGCGATGAACCCCTGCCCGTTTACTCCTGTGCTGTCCGGCCGCATCAGGCGCAGGTACCCCGGCATGATCTCTTCGGGCAGCGGgt                                            >  2:532142/1‑150 (MQ=255)                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa                                                              <  1:1498562/132‑1 (MQ=255)                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa                                                              >  2:1498562/1‑132 (MQ=255)                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt                                            >  2:1093652/1‑150 (MQ=255)                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAAGATCGGACGGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTGCGTCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt                                            >  1:806463/1‑150 (MQ=255)                                                                                    cAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgtt                                           >  1:786932/1‑150 (MQ=255)                                                                                     aaGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgttg                                          >  2:891925/1‑150 (MQ=255)                                                                                       ggATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGc                                                                                                                               <  1:753690/63‑1 (MQ=255)                                                                                       ggATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGc                                                                                                                               >  2:753690/1‑63 (MQ=255)                                                                                           tGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGc                                    <  2:1434241/150‑1 (MQ=255)                                                                                             cggttttcctgTGGGAGCGCGCACGCTCCCGACGCGACCGGTACAGGTTTATTGGGCGTTGAACCCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCgg                                  <  2:634981/143‑1 (MQ=255)                                                                                              gcCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCggg                                 >  1:196464/1‑150 (MQ=255)                                                                                                cctgcctgTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGtt                               <  2:786932/150‑1 (MQ=255)                                                                                                 gatcctgTGGGAGCGGGCAAGCCCACGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTtc                              <  1:261769/147‑1 (MQ=255)                                                                                                      tgtgGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCa                                                                 <  2:524200/110‑1 (MQ=255)                                                                                                      tgtgGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCa                                                                 >  1:524200/1‑110 (MQ=255)                                                                                                         gggAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCggg                      <  2:760196/150‑1 (MQ=255)                                                                                                         gggAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCggg                      <  1:1093652/150‑1 (MQ=255)                                                                                                          ggAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCgggg                     <  1:150638/150‑1 (MQ=255)                                                                                                           gAGCGGGCAAGCCCGCGAAGAGGCCAATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGt                    <  2:1452462/150‑1 (MQ=255)                                                                                                             gCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAg                  >  2:1380018/1‑150 (MQ=255)                                                                                                                 gCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCt              >  1:448486/1‑150 (MQ=255)                                                                                                                   aaGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTga            >  1:365225/1‑149 (MQ=255)                                                                                                                      cccGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCTTCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGcc         >  2:207024/1‑150 (MQ=255)                                                                                                                       ccGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGccc        >  1:87582/1‑150 (MQ=255)                                                                                                                             agagGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCATCg  <  2:196464/150‑1 (MQ=255)                                                                                                                                     |                                                                                                                                              GCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCCCGCATCG  >  NC_002947/1967152‑1967425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.