New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5205221	20 (1.030)	5 (0.270)	5/250	NT	23.1%	intergenic (+64/+51)	PP_4585/PP_4586	TrmH family RNA methyltransferase/hypothetical protein
	?	NC_002947	= 5205267	14 (0.750)					intergenic (+110/+5)	PP_4585/PP_4586	TrmH family RNA methyltransferase/hypothetical protein

TTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5205101‑5205221 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCTTT  <  NC_002947/5205267‑5205119                                                                                                                                                                                                                                                                                TTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGCCTGACCTTCGTC                                                                                                                          >  2:457333/1‑150          CGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTT                                                                                                                 <  1:457333/150‑1                   AAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAG                                                                                                        <  2:38118/150‑1                                                                                             CGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCG                                                                                     >  1:153122/1‑95                                                                                             CGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCG                                                                                     <  2:153122/95‑1                                                                                                                         CCGTATGAAAAGCCTTGCATGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCACTGAGCGGGTATTCAGCCCTTT  >  2:346520/1‑150                                                                                                                                                                                                                                                                                TTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5205101‑5205221 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCTTT  <  NC_002947/5205267‑5205119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.