| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5692618 | 20 (1.030) | 8 (0.450) | 5/236 | NT | 27.0% | intergenic (+31/‑139) | PP_4994/PP_4995 | hypothetical protein/exopolysaccharide biosynthesis protein |
| ? | NC_002947 | = 5692680 | 25 (1.420) | intergenic (+93/‑77) | PP_4994/PP_4995 | hypothetical protein/exopolysaccharide biosynthesis protein | |||||
AACGCATCGTGCGGCTGGCCGCGCCGTTTGCACCGTTTACCGGGGATCTAGCCGAGTTCGACCGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5692466‑5692618‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcaTGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCCCCACGGGCAAAGCGCCAGGTGCGGATGATC < NC_002947/5692680‑5692536 AACGCATCGTGCGGCTGGCCGCGCCGTTTGCACCGTTTACCGGGGATCTAGCCGAGTTCGACCGGCTGGAGATCATCCGCACCTGGCGCTTTGCACGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGG < 2:22368/150‑1 GAGTTCGACCGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCACGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCG < 2:397945/150‑1 GACCGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAG > 2:67978/1‑150 TGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGT < 1:67978/150‑1 GGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCAGCCCCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTG < 1:321886/150‑1 ATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGG < 1:343844/141‑1 ATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGAGAGCGG > 2:343844/1‑141 GTTTGTCCAGTAACTGATTTTCTGCATGTGCCAGCCCCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGC > 1:195219/1‑113 GTTTGTCCAGTAACTGATTTTCTGCATGTGCCAGCCCCTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGC < 2:195219/113‑1 CTTCGCGGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCCCCACGGGCAAAGCGCCAGGTGCGG > 1:409080/1‑150 GGGCATGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCTCCCCCGGCAATGCGTTAGGTCCGGTTGAcc > 2:473611/1‑148 AACGCATCGTGCGGCTGGCCGCGCCGTTTGCACCGTTTACCGGGGATCTAGCCGAGTTCGACCGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGTAACTGATTTTCTGCATGTGCCGGCCTCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5692466‑5692618‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcaTGCCCGCTCCCGCCGATACTCCACAGGCTTCAGCGCCGGTGAGCAACCCGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGCACATGCAGAAAATCAGTTACTGGACAAACGGTCCCCACGGGCAAAGCGCCAGGTGCGGATGATC < NC_002947/5692680‑5692536 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |