New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6080223	24 (1.240)	4 (0.220)	4/246	NT	14.6%	coding (111/897 nt)	PP_5332	hypothetical protein
	?	NC_002947	= 6080255	24 (1.300)					coding (143/897 nt)	PP_5332	hypothetical protein

CCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6080073‑6080223 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcagcCACAGCAGCGGCGGTTCGCCTACCTGCTGGTAGCTGAGGACCTGTGCGCCCTGCTGGGCGATCAGGAGTTCGGCACGGTCACTGCTGATACGCCAGCAGTTGAGTTCGCCATGTTGCTCGGTTACGACCTGAAAGGTAGCCATTG  <  NC_002947/6080255‑6080111                                                                                                                                                                                                                                                                                                          CCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAG                                                                                                                                                    >  1:81032/1‑150                                   AACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGTCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCCACAGCAGCGGCGGTTCGCCTACCTGCTGGTAG                                                                                                                  >  1:490387/1‑150                                    ACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGTCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCCACAGCAGCGGCGGTTCGCCTACCTGCTGGTAGC                                                                                                                 <  2:490387/150‑1                                        AATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCCACAGCAGCGGCGGTTCGCCTACCTGCTGGTAGCTGc                                                                                                              >  2:348542/1‑148                                        AATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCCACAGCAGCGGCGGTTCGCCTACCTGCTGGTAGCTGA                                                                                                              <  1:348542/149‑1                                                                                                                                                   TCAGCCACAGCAGCGGCGGTTCGCCTACCTGCTGGTAGCTGAGGACCTGTGCGCCCTGCTGGGCGATCAGGAGTTCGGCACGGTCACTGCTGATACGCCAGCAGTTGAGTTCGCCATGTTGCTCGGTTACGACCTGAAAGGTAGCCATTG  >  2:192664/1‑150                                                                                                                                                                                                                                                                                                          CCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6080073‑6080223 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcagcCACAGCAGCGGCGGTTCGCCTACCTGCTGGTAGCTGAGGACCTGTGCGCCCTGCTGGGCGATCAGGAGTTCGGCACGGTCACTGCTGATACGCCAGCAGTTGAGTTCGCCATGTTGCTCGGTTACGACCTGAAAGGTAGCCATTG  <  NC_002947/6080255‑6080111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.