New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6080223	24 (1.240)	4 (0.220)	4/246	NT	14.6%	coding (111/897 nt)	PP_5332	hypothetical protein
	?	NC_002947	= 6080255	24 (1.300)					coding (143/897 nt)	PP_5332	hypothetical protein

CAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGCCATGTACCAGGGAACACCAGCGCCTGCCCACGG  >  NC_002947/6080111‑6080396                                                                                                                                                 |                                                                                                                                              cAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGgctga                                                                                                                                          >  2:192664‑M2/1‑145 (MQ=255)                         ccGAGCAACATGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAgg                                                                                                                  >  1:257813/1‑150 (MQ=255)                                 cATGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCg                                                                                                          >  1:71875/1‑150 (MQ=255)                                   tGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGt                                                                                                        >  1:6503/1‑150 (MQ=255)                                           tCAACCGCTGGCGTATCAGCAGTGACCGTCCCCAACTCCTGATCGCCCAGCAGGGCGCACAGGTTCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCATGACATCTACCGCCAGGGCAAGTCAGTACGCGCCg                                                                                                >  2:352304/1‑150 (MQ=255)                                                   tgGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGc                                                                                                                <  2:316956/126‑1 (MQ=255)                                                   tgGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGc                                                                                                                >  1:316956/1‑126 (MQ=255)                                                     gCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATc                                                                                                                            <  2:102961/112‑1 (MQ=255)                                                     gCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATc                                                                                                                            >  1:102961/1‑112 (MQ=255)                                                                gTGACCGTGCCGAACTCCTGACCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCAt                                                                           <  1:157092/150‑1 (MQ=255)                                                                       tcccGCACTCCTGATCGCCCCGCAGGGCGCACAGGTCCTCACCTACCCGCAGGTAGGCGAACCGCCGCTGCTGGGGCTGAGCGACCAGGCCATCTTCCGCCAGGTCAAGTCCGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTgg                                                                    <  1:352304/148‑1 (MQ=255)                                                                       tGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTgg                                                                    >  1:383310/1‑150 (MQ=255)                                                                                  tGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAgc                                                         >  1:27876/1‑150 (MQ=255)                                                                                         ccAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAAccc                                                  >  1:292191/1‑150 (MQ=255)                                                                                                    atcaGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTcc                                       <  2:145249/148‑1 (MQ=255)                                                                                                     acaGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCa                                      <  2:257813/150‑1 (MQ=255)                                                                                                        ggTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGc                                   <  1:153244/150‑1 (MQ=255)                                                                                                           ccTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGCCAt                                >  1:482348/1‑150 (MQ=255)                                                                                                             tCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGgctgaggacctgtgcgccctgctgggcgatcaggagttcggcacggtcactgctgatacgccagcagttgagttcgccatgttgctcggttacgacctgaaaggtagccatt                               <  1:348542‑M2/149‑113 (MQ=255)                                                                                                             gcaGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGgctgaggacctgtgcgccctgctgggcgatcaggagttcggcacggtcactgctgatacgccagcagttgagttcgccatgttgctcggttacgacctgaaaggtagccatt                               >  2:348542‑M2/2‑37 (MQ=255)                                                                                                                gCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGgctgaggacctgtgcgccctgctgggcgatcaggagttcggcacggtcactgctgatacgccagcagttgagttcgacatgttgctcggttacgacctgaaaggtagccattgcgt                           <  2:490387‑M2/150‑117 (MQ=255)                                                                                                                 cTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGgctgaggacctgtgcgccctgctgggcgatcaggagttcggcacggtcactgctgatacgccagcagttgagttcgacatgttgctcggttacgacctgaaaggtagccattgcgtt                          >  1:490387‑M2/1‑33 (MQ=255)                                                                                                                       gcagGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGCCATGTACCAGGGAac                    >  2:95102/1‑150 (MQ=255)                                                                                                                           gTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGCCATGTACCAgg                        <  1:334523/142‑1 (MQ=255)                                                                                                                           gTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGCCATGTACCAgg                        >  2:334523/1‑142 (MQ=255)                                                                                                                                 gAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGCCATGTACCAGGGAACACCAGCGCCt          >  2:177179/1‑150 (MQ=255)                                                                                                                                         gctgctGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGCCATGTACCAGGGAACACCAGCGCCTGCCCACgg  <  2:292191/150‑1 (MQ=255)                                                                                                                                           tgctgTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGCCATGTAcc                           >  2:24975/1‑123 (MQ=255)                                                                                                                                           tgctgTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGCCATGTAcc                           <  1:24975/123‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                              CAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAACTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGCGCAACCCTCAGGCCGTCCAGGCCATGTACCAGGGAACACCAGCGCCTGCCCACGG  >  NC_002947/6080111‑6080396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.