New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3483915 =	11 (0.570)	5 (0.270)	5/250	NT	37.5%	coding (2052/3804 nt)	PP_3091	membrane protein
	?	NC_002947	3483952 =	6 (0.320)					coding (2015/3804 nt)	PP_3091	membrane protein

CGATCGACCAGCGAGCTGGAGATCATGAACGACTTGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCAC  >  NC_002947/3483766‑3484055                                                                                                                                                      |                                                                                                                                             ctgtcactgtccgaagaaatgctcgggcgcctggacgagcagcaggtggcctcgatcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccag                                                                                                                                              >  2:115653‑M1/150‑150 (MQ=255)       aCCAGCGAGCTGGAGATCATGAACGACTTGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCggg                                                                                                                                        >  2:452343/1‑150 (MQ=255)         cAGCGAGCTGGAGATCATGAACGACTTGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGt                                                                                                                                      >  2:186523/1‑150 (MQ=255)                       tcgggcgcctggacgagcagcaggtggcctcgatcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTgcgg                                                                                                                        <  1:100861‑M1/23‑1 (MQ=255)                           gAACGACTTGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTTCTCCAGCAACTGCACGTACAGCGTGGGATTTTTTAAGGCGTGGCCATCGTCGGCCGGGTTGCCTTCGCCTTCGGctct                                                                                                                    >  1:252132/1‑150 (MQ=255)                                  ttGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAg                                                                                                             <  2:404518/150‑1 (MQ=255)                                   tGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAgg                                                                                                            <  2:486933/150‑1 (MQ=255)                                         agcaggtggcctcgatcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGTGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTggg                                                                                                      >  1:11855‑M1/110‑150 (MQ=255)                                               gggTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGCCCCAGGCCTGGGCCAgcg                                                                                                <  1:171041/150‑3 (MQ=255)                                                        tcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGcga                                                                                       >  2:100861‑M1/95‑150 (MQ=255)                                                           tcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTgg                                                                                                       <  1:359918‑M1/40‑1 (MQ=255)                                                           tcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccatccagacccggccttcgtcgctgccagcctgccccaGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTgg                                                                                                       >  2:359918‑M1/92‑131 (MQ=255)                                                                                          cTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCATGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGt                                                     <  2:242696/150‑1 (MQ=255)                                                                                          cTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCAGt                                                     <  1:452343/150‑1 (MQ=255)                                                                                            ggCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCGTGGGGGGCTGGGGGAGGGGTGGGGGAGGCTGGGGGGGGGGGGGGGCGGGTCTGGATGGGCCTGGGGCTCGGTCa                                                   <  1:186523/150‑1 (MQ=255)                                                                                                   cTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAg                                            >  1:286732/1‑150 (MQ=255)                                                                                                                                             gCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCAc  >  1:462648/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                             CGATCGACCAGCGAGCTGGAGATCATGAACGACTTGAGGTTCTGCCGGGTTTCGTTGATCAGCTGTTCGTTGCGCGGCAACGACGGCGCCTGGCCCTGCTCCAGCAACTGCACGTACAGCGGGGCATTTTCTGCGATCACGCCAGCGTCGGCCGGGGTGCCTTCGCCTGCGGCGCTGGCCCAGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCAC  >  NC_002947/3483766‑3484055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.