New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1746298	8 (0.410)	3 (0.160)	3/248	NT	23.4%	coding (210/387 nt)	PP_1544	hypothetical protein
	?	NC_002947	= 1746325	12 (0.650)					coding (183/387 nt)	PP_1544	hypothetical protein

TGGGTCTCGCTTAAGCTCTGCCATGCTGGCCGCTTCGAACTCACGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGATCCTGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAAACCTTCTCGATCCCCAGTTTCGCGGCTGCCTTCTTCTGGCGGTCTCGGTAGTCCGC  >  NC_002947/1746184‑1746471                                                                                                                                              |                                                                                                                                                   tGGGTCTCGCTTAAGCTCTGCCATGCTGGCCGCTTCGAACTCACGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGATCCTGCGCGATCCATGACAGCGCCAGGTCCTGCCa                                                                                                                                            <  2:257489/150‑1 (MQ=255)                                  ttCGAACTCACGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGATCCTGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTc                                                                                                           >  2:450816/1‑150 (MQ=255)                                        cTCACGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGATCCTGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGAtctc                                                                                                     <  1:249322/150‑1 (MQ=255)                                           aCGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGATCCTGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGc                                                                                                  >  2:368790/1‑150 (MQ=255)                                                               tGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGATCCTGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATcc                                                                              >  2:296524/1‑150 (MQ=255)                                                                                     tCGTTCAAGGCGACGCGCCCGCTCTTCAGGATCCTGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAAAc                                                        <  1:296524/150‑1 (MQ=255)                                                                                                             ttCAGGATCCTGCGCGATCCATGACAGCGCCAGGtcctgaagagcgggcgcgtcgccttgaacgacctgacgcgccagctttttacatatcgccaaaactagcgcgtgagttcgaagcggccagcatggcagagcttaagcgagacccag                                <  1:442311‑M2/150‑117 (MQ=255)                                                                                                             ttCAGGATCCTGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAAACCTTCTCGATCCCCAGTTTCGCGGc                                >  1:54839/1‑150 (MQ=255)                                                                                                               cAGGATCCTGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAAACCTTCTCGATCCCCAGTTTCGCGGCTg                              >  2:378522/1‑150 (MQ=255)                                                                                                                 ggATCCTGCGCGATCCATGACAGCGCCAGGtcctgaagagcgggcgcgtcgccttgaacgacctgacgcgccagctttttacatatcgccaaaactagcgcgtgagttcgaa                                                                  <  1:384796‑M2/112‑83 (MQ=255)                                                                                                                 ggATCCTGCGCGATCCATGACAGCGCCAGGtcctgaagagcgggcgcgtcgccttgaacgacctgacgcgccagctttttacatatcgccaaaactagcgcgtgagttcgaa                                                                  >  2:384796‑M2/1‑30 (MQ=255)                                                                                                                       tGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAAACCTTCTCGATCCCCAGTTTcgcg                                  >  1:221521/1‑138 (MQ=255)                                                                                                                       tGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAAACCTTCTCGATCCCCAGTTTcgcg                                  <  2:221521/138‑1 (MQ=255)                                                                                                                                   gACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAATCCTTCTCGATCCCCAGTTTCGCGGCTGCCTTCTTCTGGCGGTCTCgg          <  1:450816/150‑1 (MQ=255)                                                                                                                                   gACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAAACCTTCTCGATCCCCAGTTTCGCGGCTGCCTTCTTCTGGCGGTCTCgg          <  2:54839/150‑1 (MQ=255)                                                                                                                                         gcCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAAACCTTCTCGATCCCCAGTTTCGCGGCTGCCTTCTTCTGGCGGTCTCGGTAGTcc    >  2:122836/1‑150 (MQ=255)                                                                                                                                           cAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAAACCTTCTCGATCCCCAGTTTCGCGGCTGCCTTCTTCTGGCGGTCTCGGTAGTCCGc  <  1:468382/150‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                   TGGGTCTCGCTTAAGCTCTGCCATGCTGGCCGCTTCGAACTCACGCGCTAGTTTTGGCGATATGTAAAAAGCTGGCGCGTCAGGTCGTTCAAGGCGACGCGCCCGCTCTTCAGGATCCTGCGCGATCCATGACAGCGCCAGGTCCTGCCAGAGTTCCTGCACCTGGTCGTAGCCGTGCCGCTCGATCTCCGCAGCCATGGCAGCCTTGATCCCTTCCGGCATGTTGAAGAAAACCTTCTCGATCCCCAGTTTCGCGGCTGCCTTCTTCTGGCGGTCTCGGTAGTCCGC  >  NC_002947/1746184‑1746471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.