New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5162618 =	40 (0.960)	8 (0.240)	7/218	3.1	24.9%	intergenic (+93/+108)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5162702 =	16 (0.480)					intergenic (+177/+24)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
Rejected: Coverage evenness skew score above cutoff.

AATGCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATC  >  NC_002947/5162478‑5162756                                                                                                                                             |                                                                                                                                            aaTGCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGTGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGc                                                                                                                                    <  2:148247/150‑1 (MQ=255)   tGCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCtt                                                                                                                                  <  2:493966/150‑1 (MQ=255)     cgtatggcGACCCCCGGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCCGCTCTGCTTCATCTGAAGCGGGAAACGCGGCCCCCATCCAGCGTTTCCCGCTTTTTTTTGTCTGTGTGAAATGTGCCGGTCCCTTCGCGGGCTTGc                                                                                                                                <  2:501994/143‑1 (MQ=255)     cTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGc                                                                                                                                <  1:726929/150‑1 (MQ=255)             gACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTccc                                                                                                                        >  2:302692/1‑150 (MQ=255)                   cTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTcgcg                                                                                                                                       >  2:754007/1‑129 (MQ=255)                   cTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTcgcg                                                                                                                                       <  1:754007/129‑1 (MQ=255)                        ggTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATaacc                                                                                                            <  1:302692/150‑1 (MQ=255)                               cTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGAcc                                                                                                     >  1:4238/1‑150 (MQ=255)                                  gAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTg                                                                                                  >  2:188198/1‑150 (MQ=255)                                      ccAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGaa                                                                                              >  1:701260/1‑150 (MQ=255)                                        aaGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGTCCCCATCCGGCGTTTCCCGCTTCTTTTTGTGTGTGTGAAATGCGCCGGCCCCCTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGCCCTTGAGAACt                                                                                            <  2:321104/150‑1 (MQ=255)                                           ttCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACtgtg                                                                                         <  2:4238/150‑1 (MQ=255)                                           gtCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGACGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCCACCACA‑GTATCACCACAGAACTTGAGAACtgtg                                                                                         >  2:465708/2‑150 (MQ=255)                                              tAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTg                                                                                      >  1:712854/1‑150 (MQ=255)                                                     cacCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCtgt                                                                               <  1:188198/150‑1 (MQ=255)                                                      acCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCtgtg                                                                              <  2:712854/150‑1 (MQ=255)                                                      acCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCtgtg                                                                              <  1:335586/150‑1 (MQ=255)                                                       cccTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTCCTTTTTGTCTGTGTGAAATGCGACGGCCCCTTCGCCGGCCTGCCCGCCACCACA‑CTATCACCACAGACCTTGAGAACTGTGCTGTACCtgtag                                                                             <  2:299756/150‑3 (MQ=255)                                                        ccTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTggg                                                                            >  1:616989/1‑150 (MQ=255)                                                          tgctctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAg                                                                          >  1:845887/1‑150 (MQ=255)                                                          tgctctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAg                                                                          >  1:480855/1‑150 (MQ=255)                                                           tccctgctTCACCTGAAGCGTGAAATGCCCACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGc                                                                         <  1:465708/147‑1 (MQ=255)                                                            ctctgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCg                                                                        <  1:723383/150‑1 (MQ=255)                                                               tgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGc                                                                     <  1:510000/150‑1 (MQ=255)                                                               tgctTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGc                                                                     <  2:616989/150‑1 (MQ=255)                                                                      ccTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGcc                                                                                                                               <  1:54904/86‑1 (MQ=255)                                                                      ccTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGcc                                                                                                                               >  2:54904/1‑86 (MQ=255)                                                                         gAAGCGGGAAACGCAGCCGCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAACTGAGAGGGCCCCTTCGAGGCCTTGCACGCTCTGACA‑GTATGGAAACAAACCATGAGAACTAAGATGTAACCGTGGGAGGGGGCAGGCCCCCGa                                                           >  2:148857/1‑150 (MQ=255)                                                                           aGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCCTGCCCGCTCCCACAGGTA‑CAGCACAGTTCTCAAGGTCTGTGGTGATATTATGGGAGCGGGCAAGCCCGCGAag                                                         <  1:268524/150‑1 (MQ=14)                                                                              gggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGc                                                                         <  2:410229/131‑1 (MQ=255)                                                                              gggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGc                                                                         >  1:410229/1‑131 (MQ=255)                                                                              gggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAgg                                                      <  2:701260/150‑1 (MQ=255)                                                                                gAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGcc                                                    >  2:822893/1‑150 (MQ=255)                                                                                     gCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAAc                                               >  1:967322/1‑150 (MQ=255)                                                                                         aCCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGATCCCACA‑CAATTAGCACACACATTGAGAACTGTGATGTACCTCACGACCGGGGCAAGCCCGCGCAATGGCGGTAACAGgc                                           >  1:436330/1‑150 (MQ=255)                                                                                           cccATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGgcgc                                         <  2:845887/150‑1 (MQ=255)                                                                                                                     tGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAAt               >  2:190812/1‑150 (MQ=255)                                                                                                                            gggAAATGCCCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTa        <  1:148857/148‑1 (MQ=255)                                                                                                                                  tGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCAACACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATc  <  2:584003/150‑1 (MQ=255)                                                                                                                                             |                                                                                                                                            AATGCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACA‑GTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCCTGATGAATCAGCGCTTGCGCAGAATCACACTACCAATC  >  NC_002947/5162478‑5162756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.