New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5162618 =40 (0.960)8 (0.240) 7/218 3.1 24.9% intergenic (+93/+108) PP_4544/PP_4545 hypothetical protein/beta‑ketodecanoyl‑ACP synthase
?NC_002947 5162702 = 16 (0.480)intergenic (+177/+24) PP_4544/PP_4545 hypothetical protein/beta‑ketodecanoyl‑ACP synthase
Rejected: Coverage evenness skew score above cutoff.

GGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAC  >  NC_002947/5162555‑5162836
                                                                                                                                                   |                                                                                                                                         
gggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAgg                                                                                                                                         <  2:701260/150‑1 (MQ=255)
  gAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGcc                                                                                                                                       >  2:822893/1‑150 (MQ=255)
       gCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAAc                                                                                                                                  >  1:967322/1‑150 (MQ=255)
           aCCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGATCCCACACAATTAGCACACACATTGAGAACTGTGATGTACCTCACGACCGGGGCAAGCCCGCGCAATGGCGGTAACAGgc                                                                                                                              >  1:436330/1‑150 (MQ=255)
             cccATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGgcgc                                                                                                                            <  2:845887/150‑1 (MQ=255)
                                       tGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAAt                                                                                               >  2:190812/1‑150 (MQ=255)
                                              gggAAATGCCCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTa                                                                                        <  1:148857/148‑1 (MQ=255)
                                                    tGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCAACACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATc                                                                                  <  2:584003/150‑1 (MQ=255)
                                                                 tCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCAc                                                                     <  2:480855/150‑1 (MQ=255)
                                                                         ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGACCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGaa                                                             >  2:65911/1‑149 (MQ=255)
                                                                         ttGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAg                                                             >  2:436538/1‑150 (MQ=17)
                                                                             ccGCTCCCACAGTATCACCACAGACCTTGAGAAGAGTGCGGGACGGGTGGGAGCGAGAAGGACCGCGAAGCGGAC‑‑‑ACTGGCGACATTCATGCAGGTGCTGGATTCGCAGAATCACACTACCAATCGAATACCCCGAGCCAAACGAGCTCa                                                         >  1:491879/1‑150 (MQ=255)
                                                                                  cccACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACg                                                    <  2:330935/150‑1 (MQ=255)
                                                                                           tCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAg                                           >  2:615513/1‑150 (MQ=255)
                                                                                                      cTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAg                                <  1:822893/150‑1 (MQ=255)
                                                                                                               tgtgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAac                                                       >  2:291962/1‑118 (MQ=255)
                                                                                                               tgtgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAac                                                       <  1:291962/118‑1 (MQ=255)
                                                                                                                           gtgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGaa           >  2:931256/1‑150 (MQ=255)
                                                                                                                           gtgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGaa           <  1:190812/150‑1 (MQ=255)
                                                                                                                            tgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAg          <  2:636477/150‑1 (MQ=255)
                                                                                                                             gggAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAgg         <  2:967322/150‑1 (MQ=255)
                                                                                                                                 gtgggCAAGCGCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAAt     <  2:436330/148‑1 (MQ=255)
                                                                                                                                    ggCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAc  <  1:931256/150‑1 (MQ=255)
                                                                                                                                               gAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATc    <  2:872358/137‑1 (MQ=255)
                                                                                                                                               gAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATc    >  1:872358/1‑137 (MQ=255)
                                                                                                                                                   |                                                                                                                                         
GGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGCGCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAC  >  NC_002947/5162555‑5162836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.