New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5162618 = | 40 (0.960) | 8 (0.240) | 7/218 | 3.1 | 24.9% | intergenic (+93/+108) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
? | NC_002947 | 5162702 = | 16 (0.480) | intergenic (+177/+24) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase | |||||
Rejected: Coverage evenness skew score above cutoff. |
GGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAC > NC_002947/5162555‑5162836 | gggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAgg < 2:701260/150‑1 (MQ=255) gAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGcc > 2:822893/1‑150 (MQ=255) gCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAAc > 1:967322/1‑150 (MQ=255) aCCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGATCCCACACAATTAGCACACACATTGAGAACTGTGATGTACCTCACGACCGGGGCAAGCCCGCGCAATGGCGGTAACAGgc > 1:436330/1‑150 (MQ=255) cccATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGgcgc < 2:845887/150‑1 (MQ=255) tGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAAt > 2:190812/1‑150 (MQ=255) gggAAATGCCCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTa < 1:148857/148‑1 (MQ=255) tGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCAACACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATc < 2:584003/150‑1 (MQ=255) tCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCAc < 2:480855/150‑1 (MQ=255) ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGACCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGaa > 2:65911/1‑149 (MQ=255) ttGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAg > 2:436538/1‑150 (MQ=17) ccGCTCCCACAGTATCACCACAGACCTTGAGAAGAGTGCGGGACGGGTGGGAGCGAGAAGGACCGCGAAGCGGAC‑‑‑ACTGGCGACATTCATGCAGGTGCTGGATTCGCAGAATCACACTACCAATCGAATACCCCGAGCCAAACGAGCTCa > 1:491879/1‑150 (MQ=255) cccACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACg < 2:330935/150‑1 (MQ=255) tCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAg > 2:615513/1‑150 (MQ=255) cTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAg < 1:822893/150‑1 (MQ=255) tgtgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAac > 2:291962/1‑118 (MQ=255) tgtgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAac < 1:291962/118‑1 (MQ=255) gtgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGaa > 2:931256/1‑150 (MQ=255) gtgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGaa < 1:190812/150‑1 (MQ=255) tgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAg < 2:636477/150‑1 (MQ=255) gggAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAgg < 2:967322/150‑1 (MQ=255) gtgggCAAGCGCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAAt < 2:436330/148‑1 (MQ=255) ggCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAc < 1:931256/150‑1 (MQ=255) gAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATc < 2:872358/137‑1 (MQ=255) gAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATc > 1:872358/1‑137 (MQ=255) | GGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAC > NC_002947/5162555‑5162836 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |