New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5162618 =	40 (0.960)	8 (0.240)	7/218	3.1	24.9%	intergenic (+93/+108)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5162702 =	16 (0.480)					intergenic (+177/+24)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
Rejected: Coverage evenness skew score above cutoff.

GGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAC  >  NC_002947/5162555‑5162836                                                                                                                                                    |                                                                                                                                          gggAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAgg                                                                                                                                         <  2:701260/150‑1 (MQ=255)   gAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGcc                                                                                                                                       >  2:822893/1‑150 (MQ=255)        gCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAAc                                                                                                                                  >  1:967322/1‑150 (MQ=255)            aCCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGATCCCACACAATTAGCACACACATTGAGAACTGTGATGTACCTCACGACCGGGGCAAGCCCGCGCAATGGCGGTAACAGgc                                                                                                                              >  1:436330/1‑150 (MQ=255)              cccATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGgcgc                                                                                                                            <  2:845887/150‑1 (MQ=255)                                        tGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAAt                                                                                               >  2:190812/1‑150 (MQ=255)                                               gggAAATGCCCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTa                                                                                        <  1:148857/148‑1 (MQ=255)                                                     tGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCAACACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATc                                                                                  <  2:584003/150‑1 (MQ=255)                                                                  tCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCAc                                                                     <  2:480855/150‑1 (MQ=255)                                                                          ttGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGACCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGaa                                                             >  2:65911/1‑149 (MQ=255)                                                                          ttGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAg                                                             >  2:436538/1‑150 (MQ=17)                                                                              ccGCTCCCACAGTATCACCACAGACCTTGAGAAGAGTGCGGGACGGGTGGGAGCGAGAAGGACCGCGAAGCGGAC‑‑‑ACTGGCGACATTCATGCAGGTGCTGGATTCGCAGAATCACACTACCAATCGAATACCCCGAGCCAAACGAGCTCa                                                         >  1:491879/1‑150 (MQ=255)                                                                                   cccACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACg                                                    <  2:330935/150‑1 (MQ=255)                                                                                            tCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAg                                           >  2:615513/1‑150 (MQ=255)                                                                                                       cTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAg                                <  1:822893/150‑1 (MQ=255)                                                                                                                tgtgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAac                                                       >  2:291962/1‑118 (MQ=255)                                                                                                                tgtgCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAac                                                       <  1:291962/118‑1 (MQ=255)                                                                                                                            gtgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGaa           >  2:931256/1‑150 (MQ=255)                                                                                                                            gtgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGaa           <  1:190812/150‑1 (MQ=255)                                                                                                                             tgGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAg          <  2:636477/150‑1 (MQ=255)                                                                                                                              gggAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAgg         <  2:967322/150‑1 (MQ=255)                                                                                                                                  gtgggCAAGCGCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAAt     <  2:436330/148‑1 (MQ=255)                                                                                                                                     ggCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAc  <  1:931256/150‑1 (MQ=255)                                                                                                                                                gAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATc    <  2:872358/137‑1 (MQ=255)                                                                                                                                                gAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATc    >  1:872358/1‑137 (MQ=255)                                                                                                                                                    |                                                                                                                                          GGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGTAACAGGCGCC‑‑TGATGAATCAGC‑GCTTGCGCAGAATCACACTACCAATCGAATACCCCGCACCAAACGAGCTCAACACGCCCAACGAGCCTTTGGCCAGGTCATCCTGGTACAGGTGGAAGGCAATCAC  >  NC_002947/5162555‑5162836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.