New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 85065	62 (1.490)	9 (0.250)	9/236	2.8	14.0%	intergenic (+43/+87)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
	?	NC_002947	= 85104	56 (1.540)					intergenic (+82/+48)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
Rejected: Frequency below/above cutoff threshold.

GATGCTGGCTGAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATC  >  NC_002947/84917‑85212                                                                                                                                                     |                                                                                                                                                    gATGCTGGCTGAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGt                                                                                                                                                    >  2:388275/1‑150 (MQ=255) gATGCTGGCTGAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGc                                                                                                                                                    <  1:41180‑M1/150‑2 (MQ=255)      tggctgAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTCTCGCGACGCAAGGCCGTTCCca                                                                                                                                               >  2:495999/1‑150 (MQ=255)        agtgAGCAGGCAACTGAATCCTTCAATATCTGGCGTGGCGTGAGGACGGAGACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCcaca                                                                                                                                             >  2:39786/3‑150 (MQ=38)          tgAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACaaa                                                                                                                                           <  2:124207/150‑1 (MQ=255)               aggcagCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTAcg                                                                                                                                      >  2:16894/1‑150 (MQ=255)                 gcagCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGTGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTAcgtc                                                                                                                                    <  1:587400/150‑1 (MQ=255)                          gCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTTGCAGCCC‑ATCGCGACGCAAGGCCGctcccacagaggatcggcgtacgacgt                                                                                                                          >  2:11800‑M1/1‑123 (MQ=255)                          gCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGa                                                                                                                           >  1:881505/1‑150 (MQ=255)                           ccTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGAt                                                                                                                          >  2:292085/1‑150 (MQ=255)                             ttcttTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGTGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATcc                                                                                                                        >  2:32204/1‑150 (MQ=255)                             ttcttTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATcc                                                                                                                        >  1:511309/1‑150 (MQ=255)                                  tATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGGGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCtgt                                                                                                                   <  2:61071/150‑1 (MQ=255)                                  tATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCtgt                                                                                                                   >  2:620398/1‑150 (MQ=255)                                         cgtggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCtgtg                                                                                                                  <  1:322161/144‑1 (MQ=255)                                         cgtggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCtgtg                                                                                                                  >  2:322161/1‑144 (MQ=255)                                          gtggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtgggaacgg                                                                                                           <  1:712821‑M1/150‑43 (MQ=255)                                             gcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGtggcct                                                                                                        <  1:327898‑M2/150‑7 (MQ=255)                                               gtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTTGCAGCCC‑ATCGCGACGCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtgggaacggccttgc                                                                                                     <  1:829232‑M1/150‑49 (MQ=255)                                               gtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGc                                                                                                                              <  1:357924/126‑1 (MQ=255)                                               gtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGc                                                                                                                              >  2:357924/1‑126 (MQ=255)                                                tgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGcggccttgc                                                                                                     >  2:881505‑M2/1‑141 (MQ=255)                                                   ggCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGcggccttgcgtc                                                                                                  >  1:313077‑M2/1‑138 (MQ=255)                                                         aTACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATg                                                                                            <  1:340285/150‑1 (MQ=255)                                                         aTACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATg                                                                                            <  1:651527/150‑1 (MQ=255)                                                                   ggTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAg                                                                                  <  2:511309/150‑1 (MQ=255)                                                                            tGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAg                                                                         >  1:783975/1‑150 (MQ=255)                                                                             gAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTTGCAGCCC‑ATCGCGACGCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtgggaacggccttgcgtcgcgatagggccgccaagcggccccggc                                                                       <  1:11800‑M1/150‑79 (MQ=255)                                                                             gAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGa                                                                        >  1:249274/1‑150 (MQ=255)                                                                               aCTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGAt                                                                                                                          >  1:58765/1‑98 (MQ=255)                                                                               aCTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGAt                                                                                                                          <  2:58765/98‑1 (MQ=255)                                                                                cTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTgg                                                                                                                 >  2:515507/1‑106 (MQ=255)                                                                                cTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTgg                                                                                                                 <  1:515507/106‑1 (MQ=255)                                                                                cTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATc                                                                     <  1:388275/150‑1 (MQ=255)                                                                                   cgcCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATcccc                                                                  >  1:942894/1‑149 (MQ=255)                                                                                   cgcCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCa                                                                  <  2:942894/150‑1 (MQ=255)                                                                                    gcCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCaa                                                                 <  1:292085/150‑1 (MQ=255)                                                                                      cGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCtgt                                                                                                                   >  1:537944/1‑98 (MQ=255)                                                                                      cGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCtgt                                                                                                                   <  2:537944/98‑1 (MQ=255)                                                                                      cGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAAcc                                                               >  2:800655/1‑150 (MQ=255)                                                                                        gCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGa                                                                              >  2:370012/1‑133 (MQ=255)                                                                                        gCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGa                                                                              <  1:370012/133‑1 (MQ=255)                                                                                             tcgctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTcc                                                        >  1:14651/1‑150 (MQ=255)                                                                                             tcgctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCAGCCC‑ATCGCGACGCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtgggaacggccttgcgtcgcgatagggccg                                                                                      >  1:681070‑M1/1‑56 (MQ=255)                                                                                             tcgctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCAGCCC‑ATCGCGACGCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtgggaacggccttgcgtcgcgatagggccg                                                                                      <  2:681070‑M1/119‑64 (MQ=255)                                                                                               gctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGCCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTc                                                      <  1:627951/150‑1 (MQ=255)                                                                                                  cgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtgggaacggcctt                                                                                                       >  1:862793‑M1/1‑52 (MQ=255)                                                                                                  cgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtgggaacggcctt                                                                                                       <  2:862793‑M1/98‑47 (MQ=255)                                                                                                              ggCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTAGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAATCCGGATCGGGca                                       <  2:250102/150‑1 (MQ=255)                                                                                                               gCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGcggccttgcgtcgcgatgggctgcaaagcggccccggccagctcagccccgagcgagttgccggcgcagttc                                      <  1:11800‑M2/150‑73 (MQ=255)                                                                                                                 cGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACaa                                    <  2:816972/150‑1 (MQ=255)                                                                                                                   gggCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACt                                  >  2:522603/1‑150 (MQ=255)                                                                                                                   gggCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACt                                  >  2:522278/1‑150 (MQ=255)                                                                                                                      ccGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAAc                                   >  1:1000486/1‑146 (MQ=255)                                                                                                                      ccGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAAc                                   <  2:1000486/146‑1 (MQ=255)                                                                                                                      ccGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCa                               >  1:703107/1‑150 (MQ=255)                                                                                                                       cGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc                              <  2:249274/150‑1 (MQ=255)                                                                                                                        gCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCt                                                       >  1:466693/1‑124 (MQ=255)                                                                                                                        gCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCt                                                       <  2:466693/124‑1 (MQ=255)                                                                                                                              cggcCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGcggccttgcgtcgcgatgggctgccaagcggccccggccagctcagccccgagcga                                                      >  1:681070‑M2/1‑63 (MQ=255)                                                                                                                              cggcCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGcggccttgcgtcgcgatgggctgccaagcggccccggccagctcagccccgagcga                                                      <  2:681070‑M2/119‑57 (MQ=255)                                                                                                                                    tATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTc                 >  2:351323/1‑150 (MQ=255)                                                                                                                                     aTCGCGACGCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtg                                                                                                                  >  2:439408‑M1/1‑17 (MQ=255)                                                                                                                                     aTCGCGACGCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtg                                                                                                                  <  1:439408‑M1/52‑36 (MQ=255)                                                                                                                                     aTCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAACCCGGCTCGGGCACAACTCCACCCCTTCCAGCTTCt                <  2:783975/150‑1 (MQ=255)                                                                                                                                     aTCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCt                <  1:351323/150‑1 (MQ=255)                                                                                                                                       cgcgACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGc              <  1:987566/150‑1 (MQ=255)                                                                                                                                        gcgACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCaa                                                    <  2:853821/111‑1 (MQ=255)                                                                                                                                        gcgACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCaa                                                    >  1:853821/1‑111 (MQ=255)                                                                                                                                        gcgACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCa             >  2:359819/1‑150 (MQ=255)                                                                                                                                         cgACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCaa            <  1:495999/150‑1 (MQ=255)                                                                                                                                          gACGCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtgggaacggccttgcgtcgcgatagggccgccaagcggccccggccagctcagccccgagcgagttgccggcgcagttcagccaacaccggcgccgtatccggcc           >  1:313077‑M1/1‑12 (MQ=255)                                                                                                                                             gCAAGGCCGctcccacagaggatcggcgtacgacgtactttgtgggaacggccttgcgtcgcgatagggccgccaagcggccccggccagctcagccccgagcgagttgccggcgcagttcagccaacaccggcgccgtatccggcctca        >  2:881505‑M1/1‑9 (MQ=255)                                                                                                                                             gCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGcggccttgcgtcgcgatgggctgcaaagcggccccggccagctcagccccgagcgagttgccggcgcagttcagccaacaccggcgccgtatccggcctcac        <  1:829232‑M2/150‑103 (MQ=255)                                                                                                                                              cAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAActcct       <  1:620398/150‑1 (MQ=255)                                                                                                                                               aaGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGcggccttgcgtcgcgatagggccgccaagcggccccggccagctcagccccg                                                          <  2:862793‑M2/98‑53 (MQ=255)                                                                                                                                               aaGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGcggccttgcgtcgcgatagggccgccaagcggccccggccagctcagccccg                                                          >  1:862793‑M2/1‑46 (MQ=255)                                                                                                                                               aaGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACaa                                    <  2:626934/120‑1 (MQ=255)                                                                                                                                               aaGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACaa                                    >  1:626934/1‑120 (MQ=255)                                                                                                                                                aGGCCActcccacagaggatcggcgtacgacgtactttgtgggaacggccttgcgtcgcgatagggccgccaagcggccccggccagctcagccccgagcgagttgccggcgcagttcagccaacaccggcgccgtatccggcctcacgc     <  1:327898‑M1/150‑145 (MQ=255)                                                                                                                                                 ggCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGa    >  2:107211/1‑150 (MQ=255)                                                                                                                                                   ccGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGcggccttgcgtcgcgatagggccgccaagcggccccggccagctcagccccgagcgagttgccggcgcagttcagccaacaccggcgccgtatccggcctcacgccac  <  1:712821‑M2/150‑109 (MQ=255)                                                                                                                                                     gTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCaa                                                    <  1:140661/98‑1 (MQ=255)                                                                                                                                                     gTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCaa                                                    >  2:140661/1‑98 (MQ=255)                                                                                                                                                     gTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc                              <  2:601568/120‑1 (MQ=255)                                                                                                                                                     gTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAc                              >  1:601568/1‑120 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GATGCTGGCTGAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTACGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATC  >  NC_002947/84917‑85212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.