New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5759491	40 (0.900)	11 (0.320)	7/210	3.4	26.9%	intergenic (+44/+112)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	= 5759519	29 (0.850)					intergenic (+72/+84)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
Rejected: Coverage evenness skew score above cutoff.

ACCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTC  >  NC_002947/5759380‑5759668                                                                                                                                             |                                                                                                                                                      aCCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCgg                                                                                                                                             <  2:243704/150‑1 (MQ=255) aCCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCgg                                                                                                                                             <  1:488151/150‑1 (MQ=255)  ccTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCggg                                                                                                                                            <  2:717900/150‑1 (MQ=255)   cTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGCATTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGt                                                                                                                                           <  1:1036123/150‑1 (MQ=255)                     gTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGccc                                                                                                                         <  2:931196/150‑1 (MQ=255)                          ggTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGcc                                                                                                                    >  1:479375/1‑150 (MQ=255)                             gtATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGGGTTGCCTGTGAGGGCGTCCTCGCGGGCAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTGGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGc                                                                                                                 >  2:573887/1‑150 (MQ=255)                                    gCGTGGCGGCAGAACGGGTTTGGCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGT‑ATCGGGTGGCTGACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCCGCGCCGGCAACaaaa                                                                                                          <  1:603012/150‑1 (MQ=37)                                            gcAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCggg                                                                                                                                            <  1:486931/108‑1 (MQ=255)                                            gcAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCggg                                                                                                                                            >  2:486931/1‑108 (MQ=255)                                                    ggTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGCGAGGGTTTCCCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGgc                                                                                          <  2:844041/150‑1 (MQ=255)                                                    ggTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGAGGTCTGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGgc                                                                                          <  1:874248/150‑1 (MQ=255)                                                          ccGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTc                                                                                    >  1:864686/1‑150 (MQ=255)                                                                  tGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCgg                                                                                                                                             <  1:1026111/85‑1 (MQ=255)                                                                  tGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCgg                                                                                                                                             >  2:1026111/1‑85 (MQ=255)                                                                  tGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAAcc                                                                            >  2:738638/1‑150 (MQ=255)                                                                         ttGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCtt                                                                                  <  2:326339/137‑1 (MQ=255)                                                                         ttGCCTGTGCGGGCCTCTTCGCGGGCAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCtt                                                                                  >  1:326339/1‑137 (MQ=255)                                                                                     gCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGcaca                                                          <  2:318262/149‑1 (MQ=255)                                                                                     gCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGcaca                                                          >  1:318262/1‑149 (MQ=255)                                                                                     gCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCGCTCTTGAAACCGGCAGTAATTACTGAACAg                                                         >  2:892769/1‑150 (MQ=255)                                                                                       ctctTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTa                                                       >  1:653970/1‑150 (MQ=255)                                                                                       ctctTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGGAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTATTGCACAGTa                                                       >  1:852766/1‑150 (MQ=255)                                                                                        tctTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAg                                                      >  1:964273/1‑150 (MQ=255)                                                                                             gcgGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGTGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTa                                                       >  2:453722/1‑144 (MQ=255)                                                                                             gcgGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGTGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTa                                                       <  1:453722/144‑1 (MQ=255)                                                                                                      cccGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCt                                        >  1:211262/1‑150 (MQ=255)                                                                                                       ccGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt                                       >  1:310307/1‑150 (MQ=255)                                                                                                        cGCTCCG‑ACGCAGGCAGAGGGAACGGCCCATTCCCCTGTAGGAGGGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCggatc                                      <  1:573887/150‑5 (MQ=255)                                                                                                                aCGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATa                               <  1:748008/150‑1 (MQ=255)                                                                                                                              aaCGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTg                 >  2:927245/1‑150 (MQ=255)                                                                                                                                 ggCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAAGCGCTTTCTTGAAACCCGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTgcgc              >  2:416883/1‑150 (MQ=255)                                                                                                                                   cgcAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCa                                 <  1:450747/129‑1 (MQ=255)                                                                                                                                   cgcAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCa                                 >  2:450747/1‑129 (MQ=255)                                                                                                                                        tCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAgg       <  2:211262/150‑1 (MQ=255)                                                                                                                                          cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGc                            <  2:567403/127‑1 (MQ=255)                                                                                                                                          cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGc                            >  1:567403/1‑127 (MQ=255)                                                                                                                                             tGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTc  >  2:139927/1‑150 (MQ=255)                                                                                                                                             |                                                                                                                                                      ACCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTC  >  NC_002947/5759380‑5759668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.