New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3276247 =	4 (0.180)	3 (0.140)	3/248	NT	43.2%	coding (218/312 nt)	PP_2874	hypothetical protein
	?	NC_002947	3276283 =	4 (0.190)					coding (254/312 nt)	PP_2874	hypothetical protein

GACGGCACCACACTGGACGTGCAGGTGCGCTTGTCGCGCCTGGGGGCGACGCAGCTGTTTCTGGGGTTGTACGCCGGGGATGGGCGGGCGTTGCTGGAAGAGTATTACCCCGCGCTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCGGGCTCTGGTAA  >  NC_002947/3276114‑3276375                                                                                                                                      |                                                                                                                                 gACGGCACCACACTGGACGTGCAGGTGCGCTTGTCGCGCCTGGGGGCGACGCAGCTGTTTCTGGGGTTGTACGCCGGGGATGGGCGGGCGTTGCTGGAAGAGTATTACCCCGCGCTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTgg                                                                                                                  <  2:226455/150‑1 (MQ=255)                         ttgagggttcgcacccttaccagagcccggcctgcataggccgggctttttcatgcctggcgccgctgcagacgggtttccggcagaggcaaggcgcctgttgccatcgCCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATg                                                                                          >  2:114586‑M1/110‑150 (MQ=255)                                                  cccggcctgcataggccgggctttttcatgcctggcgccgctgcagacgggtttccggcagaggcaaggcgcctgttgccatcgCCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCggg                                                                                               <  1:252051‑M1/36‑1 (MQ=255)                                                  cccggcctgcataggccgggctttttcatgcctggcgccgctgcagacgggtttccggcagaggcaaggcgcctgttgccatcgCCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCggg                                                                                               >  2:252051‑M1/85‑120 (MQ=255)                                                                                        gcgTTGCTGGAAGAGTATTACCCCGCGCTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCg                           >  2:549326/1‑150 (MQ=255)                                                                                                      gTATTACCCCGCGCTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCg             <  1:549326/150‑1 (MQ=255)                                                                                                                 cgcTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCGGGCTCTGGTaa  <  1:374934/150‑1 (MQ=255)                                                                                                                                      |                                                                                                                                 GACGGCACCACACTGGACGTGCAGGTGCGCTTGTCGCGCCTGGGGGCGACGCAGCTGTTTCTGGGGTTGTACGCCGGGGATGGGCGGGCGTTGCTGGAAGAGTATTACCCCGCGCTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCGGGCTCTGGTAA  >  NC_002947/3276114‑3276375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.