| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3276247 = | 4 (0.180) | 3 (0.140) | 3/248 | NT | 43.2% | coding (218/312 nt) | PP_2874 | hypothetical protein |
| ? | NC_002947 | 3276283 = | 4 (0.190) | coding (254/312 nt) | PP_2874 | hypothetical protein | |||||
GTGCGCTTGTCGCGCCTGGGGGCGACGCAGCTGTTTCTGGGGTTGTACGCCGGGGATGGGCGGGCGTTGCTGGAAGAGTATTACCCCGCGCTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCGGGCTCTGGTAAGGGTGCGAACCCTCAATTCAGCGGTTCGAT > NC_002947/3276138‑3276405 | ttgagggttcgcacccttaccagagcccggcctgcataggccgggctttttcatgcctggcgccgctgcagacgggtttccggcagaggcaaggcgcctgttgccatcgCCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATg > 2:114586‑M1/110‑150 (MQ=255) gcgTTGCTGGAAGAGTATTACCCCGCGCTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCg > 2:549326/1‑150 (MQ=255) gTATTACCCCGCGCTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCg < 1:549326/150‑1 (MQ=255) cgcTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCGGGCTCTGGTaa < 1:374934/150‑1 (MQ=255) catcgcccgggcgcggtcgacaccccacaccagcgcacgggCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCGGGCTCTGGTAAGGGTGCGAACCCTCaa > 2:114586‑M2/42‑150 (MQ=255) cccgggcgcggtcgacaccccacaccagcgcacgggCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCggg < 1:252051‑M2/84‑1 (MQ=255) cccgggcgcggtcgacaccccacaccagcgcacgggCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCggg > 2:252051‑M2/37‑120 (MQ=255) tGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCGGGCTCTGGTAAGGGTGCGAACCCTCAATTCAGCGGTTCGAt > 2:300465/1‑150 (MQ=255) | GTGCGCTTGTCGCGCCTGGGGGCGACGCAGCTGTTTCTGGGGTTGTACGCCGGGGATGGGCGGGCGTTGCTGGAAGAGTATTACCCCGCGCTGCCGGGCGAGACCATGACCCGTGCGCTGGTGTGGGGTGTCGACCGCGCCCGGGCGATGGCAACAGGCGCCTTGCCTCTGCCGGAAACCCGTCTGCAGCGGCGCCAGGCATGAAAAAGCCCGGCCTATGCAGGCCGGGCTCTGGTAAGGGTGCGAACCCTCAATTCAGCGGTTCGAT > NC_002947/3276138‑3276405 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |