New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2503705	14 (0.640)	3 (0.150)	3/230	NT	16.9%	intergenic (+21/‑212)	speB/PP_2197	agmatinase/hypothetical protein
	?	NC_002947	= 2503767	17 (0.860)					intergenic (+83/‑150)	speB/PP_2197	agmatinase/hypothetical protein

CATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGCATTCACACTTTTGCCGCGAACCCCTCGCGCCTTAGGCTATCAAACCCACCAGGCGCGGCATTTTCGTA  >  NC_002947/2503630‑2503903                                                                                                                                          |                                                                                                                                         cATGGAGATGCTGTGCCTGTATGCGGCGTGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCgcccgcgaatgg                                                                                                                              <  1:152880‑M2/150‑13 (MQ=255)              tgCCTGTATGCGGCGCGGCACAAGGTGGACAATGGCCAGTAGATTTTGCGGCCATTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGcc                                                                                                                 >  2:76424/1‑150 (MQ=255)                    tATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGa                                                                                                           >  2:358052/1‑150 (MQ=255)                     aTGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCTTTCGCGGGCAAGCCCGCTGCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGGGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAg                                                                                                          <  1:14285/150‑1 (MQ=255)                                 acaAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGTGCGCTCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGaa                                                                                              <  2:192860/150‑1 (MQ=255)                                               ggCCAGTAGATTTTGCGGCCATTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGGAGCCCTCCGAGGCCCATACTGAAACATCAg                                                                                       >  1:29297/1‑143 (MQ=255)                                               ggCCAGTAGATTTTGCGGCCATTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAg                                                                                       <  2:29297/143‑1 (MQ=255)                                                           ttGCGGCCATTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCACGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGCAt                                                                    >  1:225639/1‑150 (MQ=255)                                                                  cATTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGCATTCACACt                                                             <  2:152880/150‑1 (MQ=255)                                                                   aTTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCgcccgcgaatggccgcaaaatctactggccgttgtccaccttgtgccgcgccgcatacaggcacagcatctccatggc                                                            <  2:82771‑M2/150‑79 (MQ=255)                                                                    ttCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGACCGGGCCCGCCTGTGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGACACATCAGGAATCATCTCCACCCGCATTCACACttt                                                           <  1:556146/150‑1 (MQ=255)                                                                           gCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCgcccgcgaatggccgcaaaatctactggccgttgtccaccttgtgccgcgccgcatacaggcacagcatctccatggccaggg                                                       <  2:136977‑M2/147‑84 (MQ=255)                                                                           gCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCgcccgcgaatggccgcaaaatctactggccgttgtccaccttgtgccgcgccgcatacaggcacagcatctccatggccaggg                                                       >  1:136977‑M2/1‑64 (MQ=255)                                                                                         acacGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGCATTCACACTTTTGCCGCGAACCCCTCGCGCCt                                      >  1:444089/1‑150 (MQ=255)                                                                                                     caGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGCATTCACACTTTTGCCGCGAACCCCTCGCGCCTTAGGCTATCaaa                          <  2:479676/150‑1 (MQ=255)                                                                                                     caGGGCCAGAAATCTGTGGGTGAACGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGAATTCACACTTTTGCCGCGAACCCCTCGCGCCTTAGGCTATCaaa                          <  1:358052/150‑1 (MQ=255)                                                                                                          ccAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGCATTCACACTTTTGCCGCGAACCCCTCGCGCCTTAGGCTATCAAACccac                     >  1:36783/1‑150 (MQ=255)                                                                                                                      gggTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGCATTCACACTTGCTCCTCGAACCCCTCGCGCCTTAGGCTATCAAACCCACCAGGCGCGGCAt         >  1:178050/1‑150 (MQ=255)                                                                                                                       ggTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGCATTCACACTTTTGCCGCGAACCCCTCGCGCCTTAGGCTATCAAACCCACCAGGCGCGGCAtt        >  2:370899/1‑150 (MQ=255)                                                                                                                          gACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGCATTCACACTTTTGCCGCGAACCCCTCGCGCCTTAGGCTATCAAACCCACCAGGCGCGGCATTTTc     <  2:437171/150‑1 (MQ=255)                                                                                                                             cGTGGAGCGGGCGCGCCCGCGAATGGCTGGAAAGCAGCCCGGCGAGGGCCATACTGGAACATCAGGAATCATCTCCACCCGCATTCACACTTTTGCCGCGAACCCCTCGCGCCTTAGGCTATCAACCCCACCAGGCGCGGCATTTTCGTa  <  2:178050/150‑1 (MQ=255)                                                                                                                                          |                                                                                                                                         CATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCAAGCCCGCTCCCACACGTGTCTCACAGGGCCAGAAATCTGTGGGTGACCGTGGAGCGGGCGCGCCCGCGAATGGCTGCAAAGCAGCCCTCCGAGGCCCATACTGAAACATCAGGAATCATCTCCACCCGCATTCACACTTTTGCCGCGAACCCCTCGCGCCTTAGGCTATCAAACCCACCAGGCGCGGCATTTTCGTA  >  NC_002947/2503630‑2503903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.