New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 33781122 (0.560)14 (0.450) 13/210 1.6 42.2% intergenic (‑58/+71) PP_0279/PP_0280 hypothetical protein/amino acid ABC transporter permease
?NC_002947 = 337839 21 (0.680)intergenic (‑86/+43) PP_0279/PP_0280 hypothetical protein/amino acid ABC transporter permease

CCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/337639‑337811
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcacgcccgctcccacaggtGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGTTCCT  <  NC_002947/337839‑337692
                                                                                                                                                                                                                                                                                                                                   
CCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAATGATGTGTGGTGGTTTTGAGGGCCTCTTCG                                                                                                                                                                               >  2:328300/1‑150
    CTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAATGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGG                                                                                                                                                                           <  1:328300/150‑1
    CTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGG                                                                                                                                                                           <  2:611812/150‑1
      GCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCA                                                                                                                                                                         >  2:940328/1‑150
          GCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCC                                                                                                                                                                     <  1:846116/150‑1
          GCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCC                                                                                                                                                                     <  1:818420/150‑1
                     GGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTTGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                          <  1:140331/150‑1
                           GTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                          >  2:569990/1‑144
                           GTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                          <  1:569990/144‑1
                                 ACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGG                                                                                                                                                                            <  2:29591/120‑1
                                 ACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGG                                                                                                                                                                            >  1:29591/1‑120
                                              CTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCTACAGGTGTAGCGCCAACCTTGAATGTGGC                                                                                                                               >  1:206946/1‑150
                                                      GGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACC                                                                                                                       <  1:639681/150‑1
                                                                GAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCA                                                                                                                                                                         <  2:668594/92‑1
                                                                GAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCA                                                                                                                                                                         >  1:668594/1‑92
                                                                       TGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGC                                                                                                                             <  2:152716/127‑1
                                                                       TGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGC                                                                                                                             >  1:152716/1‑127
                                                                                    TTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATAC                                                                                                                        <  1:284910/119‑1
                                                                                    TTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATAC                                                                                                                        >  2:284910/1‑119
                                                                                                    GAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTG                                                                                                                   <  2:219007/108‑1
                                                                                                    GAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTG                                                                                                                   >  1:219007/1‑108
                                                                                                          GTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATAC                                                                                                                        >  1:355044/1‑97
                                                                                                          GTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATAC                                                                                                                        <  2:355044/97‑1
                                                                                                               GCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTG                                                                                                                                 >  2:968372/1‑83
                                                                                                               GCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTG                                                                                                                                 <  1:968372/83‑1
                                                                                                                                  TGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATAC                                                                                                                        >  1:62337/1‑73
                                                                                                                                  TGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATAC                                                                                                                        <  2:62337/73‑1
                                                                                                                                                        GGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAA                                 >  2:122006/1‑138
                                                                                                                                                        GGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAA                                 <  1:122006/138‑1
                                                                                                                                                           ACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGG                  >  2:884561/1‑150
                                                                                                                                                               CCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCT              >  1:354122/1‑150
                                                                                                                                                               CCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGG                  <  2:831013/146‑1
                                                                                                                                                               CCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGG                  >  1:831013/1‑146
                                                                                                                                                               CCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGACCCCACCTAAGCACCCGCTTCCAGGCCCT              >  1:675716/1‑150
                                                                                                                                                                CGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTC             >  2:814451/1‑150
                                                                                                                                                                CGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTC             >  2:722651/1‑150
                                                                                                                                                                  CTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGA           >  1:102733/1‑150
                                                                                                                                                                  CTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGA           <  1:814451/150‑1
                                                                                                                                                                   TCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGAC          <  2:102733/150‑1
                                                                                                                                                                     CCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCA        <  1:860481/150‑1
                                                                                                                                                                     CCACAGGTATAGCGCCACATTCAAGGGTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAA                                 <  2:26372/125‑1
                                                                                                                                                                     CCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGTGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCc        >  1:650199/1‑149
                                                                                                                                                                     CCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAA                                 >  1:26372/1‑125
                                                                                                                                                                     CCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCA        >  2:206946/1‑150
                                                                                                                                                                      CACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAG                   <  1:693313/138‑1
                                                                                                                                                                      CACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAG                   >  2:693313/1‑138
                                                                                                                                                                      CACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGACCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAc       <  2:675716/150‑2
                                                                                                                                                                       ACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATG                                                             <  2:862972/95‑1
                                                                                                                                                                       ACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATG                                                             >  1:862972/1‑95
                                                                                                                                                                       ACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCAAACAACCGTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGT      >  2:280917/1‑150
                                                                                                                                                                       ACAGGTGTAGCGCCAACCTTGAACATGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGT      >  1:624219/1‑150
                                                                                                                                                                          GGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGTTCC   >  1:865048/1‑150
                                                                                                                                                                           GTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCC                           <  1:856142/125‑1
                                                                                                                                                                           GTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCC                           >  2:856142/1‑125
                                                                                                                                                                           GTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGCAGTTGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGTTCCT  <  1:409166/150‑1
                                                                                                                                                                                                                                                                                                                                   
CCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/337639‑337811
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcacgcccgctcccacaggtGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGTTCCT  <  NC_002947/337839‑337692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.