| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4159142 | 41 (1.330) | 10 (0.370) | 10/238 | 1.6 | 21.9% | intergenic (+46/‑163) | PP_3661/PP_3662 | membrane protein/hypothetical protein |
| ? | NC_002947 | = 4159170 | 35 (1.290) | intergenic (+74/‑135) | PP_3661/PP_3662 | membrane protein/hypothetical protein | |||||
AGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4158996‑4159142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaggGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAACCAGCCACAGGTTGA < NC_002947/4159170‑4159032 AGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCC > 1:211396/1‑141AGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCC < 2:211396/141‑1 GCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACC < 1:245300/133‑1 GCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACC > 2:245300/1‑133 CACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTC > 1:548955/1‑150 TGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCT < 2:548955/150‑1 ATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAG > 2:439071/1‑150 ACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGG < 1:439071/150‑1 TTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAA < 2:193946/150‑1 GGGGGCTTGCGATGACCCCGGGGCTGCAGAAGCTGTTGCGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCC < 2:345275/150‑1 CCCTGGGGGTGCAGAAGCTGTTGGGCTGACTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGG < 1:362890/116‑1 CCCTGGGGGTGCAGAAGCTGTTGGGCTGACTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGG > 2:362890/1‑116 GACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTG > 1:195539/1‑80 GACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTG < 2:195539/80‑1 AACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAACCAGCCACAG < 2:682011/150‑1 ACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAACCAGCCACAGG < 2:73165/150‑1 CCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCCAGTCAGCCCAACAACTTCTGCACCCCCAGGGCACTCGCCAGCCCCCCGCCAACCAGCCACCGGT > 1:154402/1‑150 GCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAACCAGCCACAGGTTGA > 1:741818/1‑150 AGGCTGGGCCACGGGCGCTGGCCACCGGTGCGATCCTCAACCTGTGGCTGGTTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4158996‑4159142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaggGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCCAGTCAGCCCAACAGCTTCTGCACCCCCAGGGTAATCGCCAGCCCCCCGCCAACCAGCCACAGGTTGA < NC_002947/4159170‑4159032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |