New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6027949 =	37 (1.200)	8 (0.310)	6/228	2.5	24.5%	intergenic (‑37/+74)	PP_5277/kauB	MFS transporter/4‑guanidinobutyraldehyde dehydrogenase
	?	NC_002947	6028006 =	18 (0.690)					intergenic (‑94/+17)	PP_5277/kauB	MFS transporter/4‑guanidinobutyraldehyde dehydrogenase

TTCAAACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6028109‑6027949 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggagcgggcttgcccgcGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGG  >  NC_002947/6028006‑6028149                                                                                                                                                                                                                                                                                                                   TTCAAACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCG                                                                                                                                                             >  2:504637/1‑150        AGTCGGGCAACGGCCGTGACAAGTCGATTCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGC                                                                                                                                                      <  1:190102/150‑1                   GGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCAAAAAGG                                                                                                                                           <  1:504637/150‑1                                                              TGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCC                                                                                                                                                    >  1:339025/1‑98                                                              TGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCC                                                                                                                                                    <  2:339025/98‑1                                                                                                                 GCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTT                                             >  1:449745/1‑150                                                                                                                  CCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCA                                                                 <  1:411464/129‑1                                                                                                                  CCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCA                                                                 >  2:411464/1‑129                                                                                                                  CCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGC                                                                          >  1:724704/1‑120                                                                                                                  CCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGC                                                                          <  2:724704/120‑1                                                                                                                    CGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCA                                                                                     >  1:753146/1‑107                                                                                                                    CGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCA                                                                                     <  2:753146/107‑1                                                                                                                                                          TTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACT    >  1:261727/1‑150                                                                                                                                                            GCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGG  <  2:449745/150‑1                                                                                                                                                                                                                                                                                                                   TTCAAACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6028109‑6027949 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggagcgggcttgcccgcGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGG  >  NC_002947/6028006‑6028149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.