| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5112607 = | 33 (1.070) | 7 (0.270) | 6/226 | 2.4 | 25.2% | intergenic (‑148/+118) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein |
| ? | NC_002947 | 5112712 = | 14 (0.540) | intergenic (‑253/+13) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein | |||||
AGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTGGTC > NC_002947/5112564‑5112851 | agGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAgg < 2:265693/150‑1 (MQ=255) aaagggCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCAAAGGCAGCAGATCAATCAGGGCTGAGCCTTGATctccc > 1:25834/4‑149 (MQ=255) tcgcgggcaagcccgctcccacaggggtatcacaggccccgaaggttgcgcgaacatgtaggagcgggcgtgcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGaggctcaggctc > 2:103792‑M2/93‑150 (MQ=255) gcgggcaagcccgctcccacaggggtatcacaggccccgaaggttgcgcgaacatgaaggagcgggcgtgcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGctcct > 2:335‑M2/91‑150 (MQ=255) CGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGctcctc > 2:204433‑M1/1‑150 (MQ=255) aagcccgctcccacaggggtatcacaggccccgaaggttgcgcgaacatgtaggagcgggcgtgcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTg < 1:115071‑M2/29‑1 (MQ=255) aagcccgctcccacaggggtatcacaggccccgaaggttgcgcgaacatgtaggagcgggcgtgcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTg > 2:115071‑M2/85‑113 (MQ=255) ACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTcccc < 2:678912‑M1/150‑1 (MQ=255) gCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGc < 2:405543/150‑1 (MQ=255) tCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATctcctcc > 1:324357/1‑114 (MQ=255) tCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATctcctcc < 2:324357/114‑1 (MQ=255) tCGCGCAACCTTCGGGGCCTGTTATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCgg < 1:139682/150‑1 (MQ=255) acaggccccgaaggttgcgcgaacatgtaggagcgggcgtgcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTc < 1:335‑M2/89‑1 (MQ=255) ccTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATctcctcctc < 2:738288/98‑1 (MQ=255) ccTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATctcctcctc > 1:738288/1‑98 (MQ=255) ttCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGaggct > 1:285225/1‑107 (MQ=255) ttCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGaggct < 2:285225/107‑1 (MQ=255) tgtgATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCAt > 2:363690/1‑150 (MQ=255) tgATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATgg > 2:696859/1‑150 (MQ=255) aTACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAAGCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCa > 2:52861/1‑150 (MQ=255) ccTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAg > 2:632936/1‑150 (MQ=255) ttcgcgggcaagcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGaggctcaggc < 2:573440‑M2/56‑1 (MQ=255) agcgggcgtgcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTccacca < 1:103792‑M2/120‑1 (MQ=255) aagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCt < 1:678912‑M2/136‑1 (MQ=255) ggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTGGtc < 1:363690‑M2/140‑1 (MQ=255) | AGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTGGTC > NC_002947/5112564‑5112851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |