| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 310303 | 39 (1.380) | 4 (0.150) | 3/238 | NT | 9.2% | coding (2075/2346 nt) | PP_0256 | putative oxidoreductase |
| ? | NC_002947 | = 310360 | 41 (1.500) | coding (2018/2346 nt) | PP_0256 | putative oxidoreductase | |||||
TATGCCGCCGCCTGCCCGGCAGGTATGTCGAAGGCCAGCAGGGTAAAGCCTTGCACCCGGCGCACATGTTCATCCCCCCACAGCGAAACGATGTCGACCTTCTGCCCCGGCTGGAAGCCCAGGCGGATGATGTCGGCTTCGTTGGCGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/310153‑310303‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaCCACTATCTACGGCCTGGACGACCGCTACCGCGGCGTGCGTGGCCAGCGCGAGGTG < NC_002947/310360‑310305 TATGCCGCCGCCTGCCCGGCAGGTATGTCGAAGGCCAGCAGGGTAACGCCTGGTACCCGGCGCACATGTTCATCCCCCCACAGCGAAACGATGTCGACCTTCTGCCCCGGCTTGAAGCCCAGGCGGATGATGTCGGCTTCGTTGGCGAAC < 1:609605/150‑1TATGCCGCCGCCTGCCCGGCAGGTATGTCGAAGGCCAGCAGGGTAAAGCCTTGCACCCGGCGCACATGTTCATCCCCCCACAGCGAAACGATGTCGACCTTCTGCCCCGGCTGGAAGCCCAGGCGGATGATGTCGGCTTCGTTGGCGAAC > 2:564133/1‑150 ATGCCGCCGCCTGCCCGGCAGGTATGTCGAAGGCCAGCAGGGTAAAGCCTTGCACCCGGCGCACATGTTCATCCCCCCACAGCGAAACGATGTCGACCTTCTGCCCCGGCTGGAAGCCCAGGCGGATGATGTCGGCTTCGTTGGCGAACA < 1:564133/150‑1 CCGGCGCACATGTTCATCCCCCCACAGCGAAACGATGTCGACCTTCTGCCCCGGCTGGAAGCCCAGGCGGATGATGTCGGCTTCGTTGGCGAACACCACTATCTACGGCCTGGACGACCGCTACCGCGGCGTGCGTGGCCAGCGCGAGGg > 2:744873/1‑149 CGGCGCACATGTTCATCCCCCCACAGCGAAACGATGTCGACCTTCTGCCCCGGCTGGAAGCCCAGGCGGATGATGTCGGCTTCGTTGGCGAACACCACTATCTACGGCCTGGACGACCGCTACCGCGGCGTGCGTGGCCAGCGCGAGGTG < 1:744873/150‑1 CCCACAGCGAAACGATGTCGACCTTCTGCCCCGGCTGGAAGCCCAGGCGGATGATGTCGGCTTCGTTGGCGAACACCACTATCTACGGCCTGGACGACCGCTACCGCGGCGTGCGTGGCCAGCGCGAGGTG < 1:143581/131‑1 CCCACAGCGAAACGATGTCGACCTTCTGCCCCGGCTGGAAGCCCAGGCGGATGATGTCGGCTTCGTTGGCGAACACCACTATCTACGGCCTGGACGACCGCTACCGCGGCGTGCGTGGCCAGCGCGAGGTG > 2:143581/1‑131 TATGCCGCCGCCTGCCCGGCAGGTATGTCGAAGGCCAGCAGGGTAAAGCCTTGCACCCGGCGCACATGTTCATCCCCCCACAGCGAAACGATGTCGACCTTCTGCCCCGGCTGGAAGCCCAGGCGGATGATGTCGGCTTCGTTGGCGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/310153‑310303‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaCCACTATCTACGGCCTGGACGACCGCTACCGCGGCGTGCGTGGCCAGCGCGAGGTG < NC_002947/310360‑310305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |