New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2308940 =	26 (0.920)	4 (0.150)	4/238	NT	13.5%	coding (173/957 nt)	PP_2031	hypothetical protein
	?	NC_002947	2308966 =	26 (0.950)					coding (147/957 nt)	PP_2031	hypothetical protein

TGCGCAGCTGGCCGAACACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCACCGCGTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGCGCGGCGTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2309092‑2308940 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggaATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTTCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAA  >  NC_002947/2308966‑2309112                                                                                                                                                                                                                                                                                                              TGCGCAGCTGGCCGAACACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCACCGCGTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGCGCGGCGT                                                                                                                                                        >  1:376186/1‑150    GCAGCTGGCCGAACACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCGCCGCCTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGCGCGGCGTGGA                                                                                                                                                     <  1:357790/150‑1           GCCGAACACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCACCGCGTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGC                                                                                                                                              >  2:688731/1‑150                 CACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCACCGCGTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCC                                                                                                                                        <  1:688731/150‑1                                                                  TGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCT                                                                                                                        <  1:217633/117‑1                                                                  TGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCT                                                                                                                        >  2:217633/1‑117                                                                                                                                                       GGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTTCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAA  <  2:71815/150‑1                                                                                                                                                                                                                                                                                                              TGCGCAGCTGGCCGAACACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCACCGCGTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGCGCGGCGTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2309092‑2308940 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggaATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTTCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAA  >  NC_002947/2308966‑2309112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.