| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3723220 | 28 (0.990) | 4 (0.150) | 4/240 | NT | 13.0% | coding (434/927 nt) | PP_3288 | universal stress protein family protein |
| ? | NC_002947 | = 3723267 | 26 (0.950) | coding (481/927 nt) | PP_3288 | universal stress protein family protein | |||||
TCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3723124‑3723220‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGTGCAAGGGTATTCGCGTTTCGCGCAGCAACTGGATATCCAGCGAAGTGAACATTGCGCGCATCCACCAAGGCTCATGCTCGAGCTCTTTGATCAGC < NC_002947/3723267‑3723119 TCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACC > 1:74323/1‑147TCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACC < 2:74323/147‑1 AGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTG > 1:81359/1‑91 AGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTG < 2:81359/91‑1 TGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGTGCAAGGGT < 1:425050/108‑1 TGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGTGCAAGGGT > 2:425050/1‑108 TCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGTGCAAGGGTATTCGCGTTTCGCGCAGCAACTGGATATCCAGCGAAGTGAACATTGCGCGCATCCACCAAGGCTCATGCTCGAGCTCTTTGATCAGC > 2:590779/1‑150 TCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3723124‑3723220‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtCCACCGCCGCCAGAACCCTGCGTGGCAACGCATGGCTGGCCTTGTGTACCAGGTGCAAGGGTATTCGCGTTTCGCGCAGCAACTGGATATCCAGCGAAGTGAACATTGCGCGCATCCACCAAGGCTCATGCTCGAGCTCTTTGATCAGC < NC_002947/3723267‑3723119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |