New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3723220	28 (0.990)	4 (0.150)	4/240	NT	13.0%	coding (434/927 nt)	PP_3288	universal stress protein family protein
	?	NC_002947	= 3723267	26 (0.950)					coding (481/927 nt)	PP_3288	universal stress protein family protein

CTTGAATGAGATCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGATCGAGTTGCTGT  >  NC_002947/3723074‑3723369                                                                                                                                                   |                                                                                                                                                      cTTGAATGAGATCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGACCTGCGCATTCCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTaca                                                                                                                                                    <  2:401647/150‑1 (MQ=255)           aTCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGgccagc                                                                                                                                          >  1:673188/1‑150 (MQ=255)               tGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATg                                                                                                                                      >  2:680762/1‑150 (MQ=255)                    cacTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACaa                                                                                                                                                 <  1:147008/134‑1 (MQ=255)                    cacTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACaa                                                                                                                                                 >  2:147008/1‑134 (MQ=255)                     acTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGc                                                                                                                                >  2:620874/1‑150 (MQ=255)                                      tttGCCATGCTGATCAAAGAGCTCGAGCATCAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCCCACAGGGTAATggcg                                                                                                               >  2:231114/1‑150 (MQ=255)                                             tGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTgg                                                                                                        >  1:590779/1‑150 (MQ=255)                                              gCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGa                                                                                                       >  2:590779‑M2/1‑149 (MQ=255)                                                   tCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTccaccgccgccagaaccctgcgtggcaacgcatggctggccttgtgtacc                                                                                                     <  2:74323‑M1/147‑51 (MQ=255)                                                   tCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTccaccgccgccagaaccctgcgtggcaacgcatggctggccttgtgtacc                                                                                                     >  1:74323‑M1/1‑97 (MQ=255)                                                      aaGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCa                                                                                               <  2:673188/150‑1 (MQ=255)                                                           cTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCg                                                                                          <  1:231114/150‑1 (MQ=255)                                                            tCGAGCATGAGACTTGCTAAATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACTCGAATACCCTTGCACTTGGGACACAAGGCCAGCCATCGGTTGCCACGCAGGGTTCGGGCGGCGGTGGACCTGTCCAGGCCgg                                                                                         >  2:256561/1‑150 (MQ=255)                                                                               gATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTTCTTCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCCGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCtt                                                                      <  2:435073/150‑1 (MQ=255)                                                                                   cgcgcAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAAc                                                                  <  1:680762/150‑1 (MQ=255)                                                                                                cTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGTGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGAtcatca                                                     <  1:330698/150‑1 (MQ=255)                                                                                                cTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGAtcatca                                                     <  1:620874/150‑1 (MQ=255)                                                                                                     cTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCNGGCCGGNGGATCAGTTTGANGGCTTCAACGACCAGATCATCAGCGaa                                                <  1:684386/150‑1 (MQ=255)                                                                                                      tGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTccaccgccgccagaaccctgcgtggcaacgcatggctggccttgtgtaccaggtgcaagggt                                                                                         >  2:425050‑M1/1‑46 (MQ=255)                                                                                                      tGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTccaccgccgccagaaccctgcgtggcaacgcatggctggccttgtgtaccaggtgcaagggt                                                                                         <  1:425050‑M1/108‑63 (MQ=255)                                                                                                       ggATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAgc                                              >  2:653849/1‑150 (MQ=255)                                                                                                        gATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAgag                                             >  2:684386/1‑148 (MQ=255)                                                                                                                          gAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAg                           >  2:281609/1‑150 (MQ=255)                                                                                                                               gcgAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGatca                                                        >  1:676136/1‑116 (MQ=255)                                                                                                                               gcgAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGatca                                                        <  2:676136/116‑1 (MQ=255)                                                                                                                                     aCCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGaccaggtgcaagggtattcgcgtttcgcgcagcaactggatatcca                                                          <  1:425050‑M2/108‑47 (MQ=255)                                                                                                                                     aCCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGaccaggtgcaagggtattcgcgtttcgcgcagcaactggatatcca                                                          >  2:425050‑M2/1‑62 (MQ=255)                                                                                                                                       ccTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGa              >  1:34331/1‑150 (MQ=255)                                                                                                                                        cTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGAt                                                                                    >  2:681059/1‑79 (MQ=255)                                                                                                                                        cTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGAt                                                                                    <  1:681059/79‑1 (MQ=255)                                                                                                                                        cTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGcc                  <  2:657380/145‑1 (MQ=255)                                                                                                                                        cTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGcc                  >  1:657380/1‑145 (MQ=255)                                                                                                                                        cTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGAAGGGTTCTGGCGGCGGGGGACCTGTCCAGGCGGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGAt             >  1:170379/1‑150 (MQ=255)                                                                                                                                              ccTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGATCGAGt        >  1:752806/1‑149 (MQ=255)                                                                                                                                              ccTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGATCGAGt        <  2:752806/149‑1 (MQ=255)                                                                                                                                                 ggTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGaccaggtgcaagggtattcgcgtttcgcgcagcaactggatatccagcgaagtgaacattgcgcgcatccaccaaggctcatgctcgagctctttga       >  1:74323‑M2/1‑50 (MQ=255)                                                                                                                                                 ggTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGaccaggtgcaagggtattcgcgtttcgcgcagcaactggatatccagcgaagtgaacattgcgcgcatccaccaaggctcatgctcgagctctttga       <  2:74323‑M2/147‑98 (MQ=255)                                                                                                                                                   tccaccgccgccagaaccctgcgtggcaacgcatggctggccttgtgtaccaggtgcaagggtattcgcgtttcgcgcagcaactggatatccagcgaagtgaacattgcgcgcatccaccaaggctcatgctcgagctctttgatcagc  >  2:590779‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      CTTGAATGAGATCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGATCGAGTTGCTGT  >  NC_002947/3723074‑3723369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.