| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5112628 | 29 (1.030) | 5 (0.220) | 4/202 | NT | 14.1% | intergenic (‑169/+97) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein |
| ? | NC_002947 | = 5112689 | 37 (1.600) | intergenic (‑230/+36) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein | |||||
ATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5112458‑5112628‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgctggcctcttcgcgggcaAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAAAGCCCACTGGGCAGAAAATCATGCCCAGCCCCACAAAACCCTCTACCCTCCAGTGCGTTCCCCT < NC_002947/5112689‑5112542 ATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTT < 2:92520/150‑1 TCTGGGCACCTCCTGTTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTG > 2:404570/1‑150 GCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTG < 1:670030/150‑1 CTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCT > 1:607184/1‑150 TCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTC > 2:695707/1‑150 CGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTC < 1:497421/150‑1 GGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTAGTCATTATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCGTGCCCGCgaaga < 1:656049/150‑6 CGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGA > 2:561239/1‑150 GCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAA < 1:561239/150‑1 TGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCG < 1:448213/71‑1 TGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCG > 2:448213/1‑71 GAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA > 1:436572/1‑146 GAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA < 2:436572/146‑1 TGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAAAGCCCACTGGGCAGAAAATCATGCCCAGCCCCACAAAACCCTCTAC < 1:597451/150‑1 CCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAAAGCCCACTGGGCAGAAAATCATGCCCAGCCCCACAAAACCCTCTACCCTCCA < 2:328036/150‑1 CGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCACGAAGAGGCCAGCACAAAGCCCACTGGGCAGAAAATCATGCCCAGCCCCACAAAACCCTCTACCCTCCAGTGCGT < 2:731395/150‑1 CGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAAAGCCCACTGGGCAGAAAATCATGCCCAGCCCCACAAAACCCTCTACCCTCCAGTGCGTTC > 1:498259/1‑150 CAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAAAGCCCACTGGGCAGAAAATCATGCCCAGCCCCACAAAACCCTCTACCCTCCAGTGCGTTCCCCT > 1:159585/1‑150 AAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAAAGCCCACTGGGCAGAAAA < 2:411825/103‑1 AAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAAAGCCCACTGGGCAGAAAA > 1:411825/1‑103 ATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5112458‑5112628‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgctggcctcttcgcgggcaAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAAAGCCCACTGGGCAGAAAATCATGCCCAGCCCCACAAAACCCTCTACCCTCCAGTGCGTTCCCCT < NC_002947/5112689‑5112542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |