New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1657857 =	31 (1.100)	4 (0.150)	4/230	NT	13.6%	coding (679/1698 nt)	PP_1450	TPS family activation/secretion protein
	?	NC_002947	1657905 =	22 (0.840)					coding (631/1698 nt)	PP_1450	TPS family activation/secretion protein

GCACCGTGCGGGCCAACGACAGGCGCAGCTCATCATTGAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAGTGGCTGCCCAAGCAGGCCTGGGAA  >  NC_002947/1657710‑1658004                                                                                                                                                    |                                                                                                                                                    gCACCGTGCGGGCCAACGACAGGCGCAGCTCATCATTGAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGc                                                                                                                                                   <  2:214034/150‑1 (MQ=255)    ccGTGCGGGCCAACGACAGGCGCAGCTCATCATTGAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCg                                                                                                                                                >  1:701580/1‑150 (MQ=255)          gggCCAACGACAGGCGCAGCTCATCATTGAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCa                                                                                                                                          <  1:83589/150‑1 (MQ=255)           ggCCAACGACAGGCGCAGCTCATCATTGAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCAc                                                                                                                                         <  1:62525/150‑1 (MQ=255)              cAACGACAGGCGCAGCTCATCATTGAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGAc                                                                                                                                      >  1:620356/1‑150 (MQ=255)                                 tcatTGAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGc                                                                                                                   <  2:246399/150‑1 (MQ=255)                                  catTGAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCa                                                                                                                  <  2:620356/150‑1 (MQ=255)                                  catTGAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCa                                                                                                                  <  2:379018/150‑1 (MQ=255)                                      gAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTc                                                                                                              <  2:615401/150‑1 (MQ=255)                                              gCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGgca                                                                                                      <  1:304375/150‑1 (MQ=255)                                                  gCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGGGGCCGGTCAGCTCTCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGACGGGCAGCaa                                                                                                  <  2:154659/150‑1 (MQ=255)                                                      tCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTg                                                                                              >  1:326013/1‑150 (MQ=255)                                                             ttgggcagccactgtacctgcccgaccttgagcaaggcctggaccagctcaaccgccttcgcgcctatgaactgggcgccaccttgcTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCgg                                                                                                         >  2:248974‑M1/88‑132 (MQ=255)                                                             ttgggcagccactgtacctgcccgaccttgagcaaggcctggaccagctcaaccgccttcgcgcctatgaactgggcgccaccttgcTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCgg                                                                                                         <  1:248974‑M1/45‑1 (MQ=255)                                                                   cGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTg                                                                                                                            <  2:353991/107‑1 (MQ=255)                                                                   cGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTg                                                                                                                            >  1:353991/1‑107 (MQ=255)                                                                   cGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCAt                                                                                 >  2:70715/1‑150 (MQ=255)                                                                             gcgGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGc                                                                                                                                                   >  2:211430/1‑74 (MQ=255)                                                                             gcgGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGc                                                                                                                                                   <  1:211430/74‑1 (MQ=255)                                                                                   gcggcCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGtt                                                                 <  1:9489/150‑1 (MQ=255)                                                                                     ggcCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGa                                                               >  1:528595/1‑150 (MQ=255)                                                                                         ggTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTg                                                           >  2:73357/1‑150 (MQ=255)                                                                                                   cTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCt                                                 >  2:399437/1‑150 (MQ=255)                                                                                                         cagctcaaccgccttcgcgcctatgaactgggcgccaccttgcTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGgca                                                                                                      <  2:17703‑M1/48‑1 (MQ=255)                                                                                                         cagctcaaccgccttcgcgcctatgaactgggcgccaccttgcTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGgca                                                                                                      >  1:17703‑M1/44‑91 (MQ=255)                                                                                                               tCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCg                                     >  1:573821/1‑150 (MQ=255)                                                                                                               tCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCg                                     <  2:528595/150‑1 (MQ=255)                                                                                                                    gCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAg                                <  1:73357/150‑1 (MQ=255)                                                                                                                    gCGGCTGTCCAGGTGCAAGCGTGAAACAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGAGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAg                                >  2:189534/1‑150 (MQ=255)                                                                                                                     cGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAgg                               <  1:399437/150‑1 (MQ=255)                                                                                                                       gCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGc                                                   <  2:355990/128‑1 (MQ=255)                                                                                                                       gCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGc                                                   >  1:355990/1‑128 (MQ=255)                                                                                                                       gCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTa                             >  2:741897/1‑150 (MQ=255)                                                                                                                           tCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGAGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAGt                         <  2:76232/150‑1 (MQ=255)                                                                                                                                gTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAGTGGCTg                    >  1:460627/1‑150 (MQ=255)                                                                                                                                 tGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAGTGGCTGc                   <  2:573821/150‑1 (MQ=255)                                                                                                                                             gCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAg                          <  2:431773/131‑1 (MQ=255)                                                                                                                                             gCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAg                          >  1:431773/1‑131 (MQ=255)                                                                                                                                                  tttGCCCGGCTGCACGACCACGCGGGTGGCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAGTGGCTGCCCAAGCAGGCCTGGGaa  <  2:742421/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCACCGTGCGGGCCAACGACAGGCGCAGCTCATCATTGAGGCCAAGCGGGCTGTCCAGGCCAATGCCGAGGTTGACGCGGTGGCGGCCGGTCAGCTCGCTGCCCCGGTTGTCGAAGCGGCTGTCCAGGTGCCAGCGTGAAGCAACCTTGCCCGGCTGCACGACCACGCGGGTGCCGCCCTGCAGTTCGCCGGGCAGCAAGGTGGCGCCCAGTTCATAGGCGCGAAGGCGGTTGAGCTGGTCCAGGCCTTGCTCAAGGTCGGGCAGGTACAGTGGCTGCCCAAGCAGGCCTGGGAA  >  NC_002947/1657710‑1658004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.