New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3915818	32 (1.140)	3 (0.110)	3/230	NT	10.0%	coding (743/1176 nt)	PP_3455	multidrug RND transporter membrane fusion protein
	?	NC_002947	= 3915870	24 (0.910)					coding (795/1176 nt)	PP_3455	multidrug RND transporter membrane fusion protein

ACCCCGCTGGCGACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAGGCAGCTACGTGCGGGTACG  >  NC_002947/3915676‑3915965                                                                                                                                               |                                                                                                                                                    accCCGCTGGCGACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGAt                                                                                                                                              <  2:262732/150‑1 (MQ=255)  ccccGCTGGCGACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGa                                                                                                                                               >  2:553578/1‑148 (MQ=255)  ccccGCTGGCGACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGa                                                                                                                                               <  1:553578/148‑1 (MQ=255)            gACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAACAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAgcgc                                                                                                                                   >  2:166486/1‑150 (MQ=255)               cATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTa                                                                                                                                <  2:145921/150‑1 (MQ=255)                aTCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTAc                                                                                                                               >  2:255106/1‑150 (MQ=255)                    agcagTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGc                                                                                                                           >  1:403538/1‑150 (MQ=255)                              cccGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCaa                                                                                                                 >  2:96490/1‑150 (MQ=255)                                       tGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATgtcggagaacagcagcttgcccggcagcgggtaggcgctgccgtc                                                                                                        >  2:110637‑M1/1‑105 (MQ=255)                                          cGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTtctc                                                                                                     <  2:623014/150‑1 (MQ=255)                                                 aCCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTTCGCGCAGGCGAATTGCAGCAGGTGGGGGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACatc                                                                                              <  2:88521‑M2/150‑4 (MQ=255)                                                     aGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACatcagcg                                                                                          <  1:742730‑M2/150‑8 (MQ=255)                                                      gTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATgtcggagaacagcagcttgcccggcagcgggtaggcgctgccgtcatcctggatcagcgt                                                                                         <  1:110637‑M1/150‑61 (MQ=255)                                                      gTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCAATGCGCAACAACGAATATCAGCGGGTGGGCGACGGTCATGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGGTGCCGTGCAAGCTGCTGTTCTCCGACatcagcgt                                                                                         <  1:694468‑M2/150‑9 (MQ=255)                                                       tCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATgtcggagaacagcagcttgcccggcagcgggtaggcgctgccgtcatcctggatcagcgtg                                                                                        <  1:425519‑M1/150‑62 (MQ=255)                                                       tCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTc                                                                                        <  1:704857/150‑1 (MQ=255)                                                       tCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTc                                                                                        <  1:96490/150‑1 (MQ=255)                                                         tACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCGAGGAAGAGCGTCGTGTCGGGCCGCTGCCTGGCAAGCTGCTGTTCTCCGACATCAGCGTCgg                                                                                      >  2:209601/1‑149 (MQ=255)                                                                   cTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGAc                                                                                                 <  1:156337/129‑1 (MQ=255)                                                                   cTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGAc                                                                                                 >  2:156337/1‑129 (MQ=255)                                                                      aaCGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCaccaac                                                                         >  1:322564/1‑150 (MQ=255)                                                                      aaCGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCaccaac                                                                         <  1:91024/150‑1 (MQ=255)                                                                         gCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAg                                                                      >  1:104695/1‑150 (MQ=255)                                                                                gccgcgccCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCa                                                                                 <  1:459618/132‑1 (MQ=255)                                                                                gccgcgccCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCa                                                                                 >  2:459618/1‑132 (MQ=255)                                                                                 ccgcgccCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCt                                                              >  1:155963/1‑150 (MQ=255)                                                                                  cgcgccCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTg                                                             >  2:525192/1‑150 (MQ=255)                                                                                                 ggCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTcccc                                              <  2:742730/150‑1 (MQ=255)                                                                                                            gcagGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGAc                                     >  1:296520/1‑148 (MQ=255)                                                                                                            gcagGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGAc                                     <  2:296520/148‑1 (MQ=255)                                                                                                               ggTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGGCCTCGa                                <  2:104695/150‑1 (MQ=255)                                                                                                                     cGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACctgct                          <  1:525192/150‑1 (MQ=255)                                                                                                                          gCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGCTCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAg                     <  2:694468/150‑1 (MQ=255)                                                                                                                           ccAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGAc                                                                                     >  1:512223/1‑85 (MQ=255)                                                                                                                           ccAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGAc                                                                                     <  2:512223/85‑1 (MQ=255)                                                                                                                           ccAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCGACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAgg                    <  1:166486/150‑1 (MQ=255)                                                                                                                                cACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAGGCAGCt               >  1:475865/1‑150 (MQ=255)                                                                                                                                      ccACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAGGCAGCTACGTGc         <  2:322564/150‑1 (MQ=255)                                                                                                                                       cACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACatcagcgtggcgcgtgcctggccgtcgcccacctgctgcaattcgccggcgcgcagggcgcggcgcagggcgttgagctcgcgggtaga        <  1:425519‑M2/150‑90 (MQ=255)                                                                                                                                        aCGCTGATgtcggagaacagcagcttgcacggcaccgggtaggcgctgccgtcatcctggatcagcgtggcgcgtgcatgaccgtcgcccacccgctgatattcgttgttgcgcattgcgcggcgcagggcgttgagctcgcgggtagac       <  1:694468‑M1/150‑143 (MQ=255)                                                                                                                                        aCGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACatcagcgtggcgcgtgcctggccgtcgcccacctgctgcaattcgccggcgcgcagggcgcggcgcagggcgttgagctcgcgggtagac       <  1:110637‑M2/150‑91 (MQ=255)                                                                                                                                         cGCTGATgtcggagaacagcagcttgcccggcagcgggtaggcgctgccgtcatcctggatcagcgtggcgcgtgcctggccgtcgcccacctgctgcaattcgccggcgcgcagggcgcggcgcagggcgttgagctcgcgggtagact      <  1:742730‑M1/150‑144 (MQ=255)                                                                                                                                             gATgtcggagaacagcagcttgcccggcagcgggtaggcgctgccgtcatcctggatcagcgtggcgcgtgcctggccgtcccccacctgctgcaattcgcctgcgcgaagggcgcggcgcagggcgttgagctcgcgggtagactgggt  <  2:88521‑M1/150‑148 (MQ=255)                                                                                                                                               |                                                                                                                                                    ACCCCGCTGGCGACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAGGCAGCTACGTGCGGGTACG  >  NC_002947/3915676‑3915965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.