| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5896257 = | 23 (0.820) | 4 (0.150) | 4/234 | NT | 14.3% | intergenic (‑26/+159) | cysU/sbp‑II | sulfate ABC transporter permease CysT/sulfate ABC transporter substrate‑binding protein |
| ? | NC_002947 | 5896277 = | 26 (0.970) | intergenic (‑46/+139) | cysU/sbp‑II | sulfate ABC transporter permease CysT/sulfate ABC transporter substrate‑binding protein | |||||
TCAGCTGCGAGGCATGGATGAACATGGCCGCCAGCGGTATCAGCACGATCAGGCTGAGGTACACCAAGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTTGTGGAAGCGACCTTGTGCCGCGAATGGGCCGCACGCGGCCCCG > NC_002947/5896108‑5896401 | tCAGCTGCGAGGCATGGATGAACATGGCCGCCAGCGGTATCAGCACGATCAGGCTGAGGTACACCAAGGTGTAGCCCATCGTCAGCCCGAAGCCGGGTCTGAGGGGTTAGATATACCGCGACACAAATGGTCCGGTTTGAACGCACTAAg > 2:39192/1‑150 (MQ=255)tCAGCTGCGAGGCATGGATGAACATGGCCGCCAGCGGTATCAGCACGATCAGGCTGAGGTACACCAAGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAg > 1:574057/1‑150 (MQ=255) gcacagtaagcgccaaaggaaagcggggccgcgtgcggcccattcgcggcacaaggtcgcttccacaaggaaccatgatctcctgtgggagcggcgttgtgtcgcgaatgggctgccaagcagccccaggattcaaaagcttgcaccgGc < 2:365537‑M1/2‑1 (MQ=255) cagtaagcgccaaaggaaagcggggccgcgtgcggcccattcgcggcacaaggtcgcttccacaaggaaccatgatctcctgtgggagcggccttgtgtcgcgaatgggctgccaagcagccccaggattcaaaagcttgcaccgGCCCg > 1:328393‑M1/146‑150 (MQ=255) cagtaagcgccaaaggaaagcggggccgcgtgcggcccattcgcggcacaaggtcgcttccacaaggaaccatgatctcctgtgggagcggccttgtgtcgcgaatgggctgccaagcagccccaggattcaaaagcttgcaccgGCCCg < 1:385508‑M1/5‑1 (MQ=255) ccAGCGGTATCAGCACGATCAGGCTGAGGTACACCAAGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCt > 2:428391/1‑150 (MQ=255) aTCAGGCTGAGGTACACCAAGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGgctg > 1:720034/1‑150 (MQ=255) caaggtcgcttccacaaggaaccatgatctcctgtgggagcggccttgtgtcgcgaatgggctgccaagcagccccaggattcaaaagcttgcaccgGCCCgg > 1:250245‑M1/98‑103 (MQ=255) caaggtcgcttccacaaggaaccatgatctcctgtgggagcggccttgtgtcgcgaatgggctgccaagcagccccaggattcaaaagcttgcaccgGCCCgg < 2:250245‑M1/6‑1 (MQ=255) tgggctACACCTTGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTgggg < 1:452878/135‑1 (MQ=255) gTACACCAAGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGccc > 1:636309/1‑150 (MQ=255) cacCAAGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCAtt > 1:675507/1‑150 (MQ=255) acCAAGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTc > 1:607457/1‑150 (MQ=255) ccAAGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTcg < 2:675507/150‑1 (MQ=255) cAAGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTcgc > 1:83066/1‑150 (MQ=255) tgtAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGacac > 1:555640/1‑150 (MQ=255) gCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAgg > 1:103657/1‑150 (MQ=255) cccGAAGCCGGGTATGACGGGGCAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAg < 1:531200/150‑1 (MQ=255) ccGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAgg > 2:243579/1‑150 (MQ=255) gggggAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTtgt > 2:114431/1‑150 (MQ=255) gggggAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTtgt > 2:114433/1‑150 (MQ=255) gggggAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAAGCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTtgt < 2:83066/150‑1 (MQ=255) gcgACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTTGTGGAAGCGACCTtgt > 2:293547/1‑150 (MQ=255) gACATAAATATCCCTGGGTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTTGTGGAAGCGACCTTGTGc > 2:385508/1‑150 (MQ=255) cccTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTTGTGGAAGCGACCTTGTGCCGCGAATGGGc < 2:636309/150‑1 (MQ=255) cccTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTTGTGGAAGCGACCTTGTGCCGCGAATGGGc < 2:720034/150‑1 (MQ=255) cTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTTGTGGAAGCGACCTTGTGCCGCGAATGGGCCg > 2:520050/1‑150 (MQ=255) cTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTACTTGTGGAAGCGACCTTGTGCCGCGAATGGGCCg > 1:364195/1‑150 (MQ=255) aaaagcttgcaccgGCCCGGGATTGTTTCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTtgt < 1:664125‑M1/104‑1 (MQ=255) aaaagcttgcaccgGCCCGGGATTGTTTCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTtgt > 2:664125‑M1/15‑118 (MQ=255) ttGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTTGTGGAAGCGACCTTGTGCCGCGAATGGGCCGCAcg > 1:365537/1‑150 (MQ=255) aaagcttgcaccgGCCCGGGATTGTTTCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTc > 1:556461‑M1/14‑112 (MQ=255) aaagcttgcaccgGCCCGGGATTGTTTCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTc < 2:556461‑M1/99‑1 (MQ=255) aCGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTTGTGGAAGCGACCTTGTGCCGCGAATGGGCCGCACGCGGc < 2:607457/150‑1 (MQ=255) aCTAAGCCCGGAAACAATCCCGGGCCGGTGCACGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTTGTGGAAGCGACCTTGTGCCGCGAATGGGCCGCACGCGGCCCCg > 1:93684/1‑150 (MQ=255) aCTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAg > 1:465196/1‑61 (MQ=255) aCTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAg < 2:465196/61‑1 (MQ=255) | TCAGCTGCGAGGCATGGATGAACATGGCCGCCAGCGGTATCAGCACGATCAGGCTGAGGTACACCAAGGTGTAGCCCAGCGTCAGCCCGAAGCCGGGTATGACGGGGGAGATACGACGCGACATAAATATCCCTGGTTGAACGCACTAAGCCCGGAAACAATCCCGGGCCGGTGCAAGCTTTTGAATCCTGGGGCTGCTTGGCAGCCCATTCGCGACACAAGGCCGCTCCCACAGGAGATCATGGTTCCTTGTGGAAGCGACCTTGTGCCGCGAATGGGCCGCACGCGGCCCCG > NC_002947/5896108‑5896401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |