| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 217935 = | 45 (1.600) | 3 (0.110) | 3/230 | NT | 7.1% | coding (23441/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 217993 = | 37 (1.410) | coding (23499/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
ATGGTGTGGGTAACCAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAACGTGCAGTCCGATG > NC_002947/217845‑218141 | aTGGTGTGGGTAACCAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGt < 2:100763/150‑1 (MQ=255) ccgtcttcagatcctcgccggtaatgccgttgccgccagtacccaggcctttgaggctggtccagacttccttggtcagccctttggacTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTc > 2:400942‑M1/90‑150 (MQ=255) ggTGTGGGTAACCAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTcc < 1:525800/150‑1 (MQ=255) gtgtGGGTAACCAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATGAGCCCGGTTTCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCa > 2:48080/1‑150 (MQ=255) gtgtGGGTAACCAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCa > 2:729336/1‑150 (MQ=255) gtgtGGGTAACCAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCa > 2:153845/1‑150 (MQ=255) gtgGGTAACCAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCaaa < 2:688146/150‑1 (MQ=255) gtgGGTAACCAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCaaa < 1:544154/150‑1 (MQ=255) tAACCAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCt > 2:204501/1‑150 (MQ=255) cAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGAcc > 2:446493/1‑150 (MQ=255) cAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGAcc < 1:729336/150‑1 (MQ=255) gAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCATCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCaa < 2:82672/150‑1 (MQ=255) aaGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAg < 2:220151/150‑1 (MQ=255) tGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGt > 1:671080/1‑150 (MQ=255) tACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTgg < 1:153845/150‑1 (MQ=255) gCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGAcc > 2:708762/1‑150 (MQ=255) cccAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGGCCAACGTGCCGATCAAGGAAGACGGGACCa > 2:418969/1‑150 (MQ=255) cAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGc < 2:671080/150‑1 (MQ=255) aagttcaagCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCaaa > 1:506289/1‑150 (MQ=255) caagCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGCTTGCGGACAAACCGACCCTGAGCTTCGGCAGCGCGGATATCGAGTCCAAAGTGCTGACCAAGGACGTCTGGACAAGCCTCAAAGGCCt > 2:40570/1‑150 (MQ=255) caggcctttgaggctggtccagacttccttggtcagccctttggacTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGt < 2:76254‑M1/60‑1 (MQ=255) caggcctttgaggctggtccagacttccttggtcagccctttggacTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGt > 1:76254‑M1/47‑106 (MQ=255) aagCCGAACAACGACACCCACCGGGGCAGCGAAGTGACCAGGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTg > 2:559144/1‑150 (MQ=255) agCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACAAGCCTCAAAGGCCTgg < 1:446493/150‑1 (MQ=255) gCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTggg < 2:506289/150‑1 (MQ=255) ccGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGt > 2:620335/1‑150 (MQ=255) aCCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCa > 1:330067/1‑150 (MQ=255) ccATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGa > 2:396480/1‑150 (MQ=255) gAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGAc > 1:222687/1‑150 (MQ=255) gactcgatatcggcgctgccgaagctcagggtcggtttgtcggcaaccgggctgatatcgaGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACgg > 2:400942‑M2/62‑150 (MQ=255) actcgatatcggcgctgccgaagctcagggtcggtttgtcggcaaccgggctgatatcgaGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTg > 1:76254‑M2/61‑106 (MQ=255) actcgatatcggcgctgccgaagctcagggtcggtttgtcggcaaccgggctgatatcgaGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTg < 2:76254‑M2/46‑1 (MQ=255) gTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTc < 1:263776/150‑1 (MQ=255) ATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTg > 2:222687‑M1/1‑150 (MQ=255) aGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTa < 2:711286/100‑1 (MQ=255) aGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTa > 1:711286/1‑100 (MQ=255) cGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGAc > 1:542004/1‑61 (MQ=255) cGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGAc < 2:542004/61‑1 (MQ=255) cAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACAAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGaa < 1:418969/150‑1 (MQ=255) ccGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTg > 1:420097/1‑78 (MQ=255) ccGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTg < 2:420097/78‑1 (MQ=255) ccGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTcc > 2:732716/1‑150 (MQ=255) ccTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCcagcag < 1:620335/150‑1 (MQ=255) cTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTgg < 1:88228/49‑1 (MQ=255) cTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTgg > 2:88228/1‑49 (MQ=255) gCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTg < 1:63193/69‑1 (MQ=255) gCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTg > 2:63193/1‑69 (MQ=255) aGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAAc < 1:310185/150‑1 (MQ=255) aGCGACGATATCGATTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAAc < 1:40570/150‑1 (MQ=255) gcCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAACGTg < 2:330067/150‑1 (MQ=255) tcgaGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAACGTGCAGTCCg < 1:732716‑M2/146‑1 (MQ=255) aGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAACGTGCAGTCCGATg < 1:396480‑M2/149‑1 (MQ=255) | ATGGTGTGGGTAACCAGAAGGCTGACTACGCCCAGTTCAAGTTCAAGCCGAACGATGGCACCAACCTGGGCAGCGAAGTGACCATGAAGGTCGATATCAGCCCGGTTGCCGACAAACCGACCCTGAGCTTCGGCAGCGCCGATATCGAGTCCAAAGGGCTGACCAAGGAAGTCTGGACCAGCCTCAAAGGCCTGGGTACTGGCGGCAACGGCATTACCGGCGAGGATCTGAAGACGGTCTTTGCCAACTCCGGCAGCGCGAACTCCAGCAGCACCACTACCAACGTGCAGTCCGATG > NC_002947/217845‑218141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |