New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 242078	31 (1.100)	7 (0.260)	7/234	NT	18.5%	intergenic (+10/‑213)	PP_0189/PP_0190	heme biosynthesis protein/disulfide bond formation protein B
	?	NC_002947	= 242100	32 (1.190)					intergenic (+32/‑191)	PP_0189/PP_0190	heme biosynthesis protein/disulfide bond formation protein B

CGCCTGCTCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTGAAACAAAGCGT  >  NC_002947/241952‑242236                                                                                                                                                     |                                                                                                                                         cGCCTGCTCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTt                                                                                                                                         <  1:529049‑M2/150‑2 (MQ=255)       cTCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTggggg                                                                                                                                   <  2:529049/150‑1 (MQ=255)        tCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttg                                                                                                                                       >  1:189299‑M2/1‑142 (MQ=255)        tCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttg                                                                                                                                       <  2:189299‑M2/145‑4 (MQ=255)              ggCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTaa                                                                                                                            <  1:603834/150‑1 (MQ=255)               gCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAAt                                                                                                                           >  2:475165/1‑150 (MQ=255)                 tGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGACTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttgggg                                                                                                                                    >  1:220643‑M2/1‑133 (MQ=255)                 tGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGACTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttgggg                                                                                                                                    <  2:220643‑M2/139‑7 (MQ=255)                  gggCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTa                                                                                                                        <  2:318456/150‑1 (MQ=255)                   ggCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTAt                                                                                                                       <  1:96237/150‑1 (MQ=255)                       agaCCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCttt                                                                                                                   <  1:186788/150‑1 (MQ=255)                           cGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCt                                                                                                               >  2:5381/1‑150 (MQ=255)                            gAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTg                                                                                                              >  2:555259/1‑150 (MQ=255)                               cgcAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCa                                                                                                           <  1:5381/150‑1 (MQ=255)                                  agcaACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGtt                                                                                                        <  1:2313/150‑1 (MQ=255)                                                       ggCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGa                                                                                                     >  2:415143/1‑132 (MQ=255)                                                       ggCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGa                                                                                                     <  1:415143/132‑1 (MQ=255)                                                                 tgctgGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGcctcc                                                                         <  1:475165/150‑1 (MQ=255)                                                                                   tgGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCa                                                                                          >  2:133550/1‑115 (MQ=255)                                                                                   tgGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCa                                                                                          <  1:133550/115‑1 (MQ=255)                                                                                       gcTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCCAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCa                                                                                                                                 <  1:574059/72‑1 (MQ=255)                                                                                       gcTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCa                                                                                                                                 >  2:574059/1‑72 (MQ=255)                                                                                             tttGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAg                                                                                                                                <  1:471896/67‑1 (MQ=255)                                                                                             tttGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAg                                                                                                                                >  2:471896/1‑67 (MQ=255)                                                                                                  cAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCa                                        >  2:153962/1‑150 (MQ=255)                                                                                                   aGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAg                                       >  2:455920/1‑150 (MQ=255)                                                                                                      aGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGa                                    >  2:250200/1‑150 (MQ=255)                                                                                                         cGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACtt                                 <  1:339665/150‑1 (MQ=255)                                                                                                          gTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTg                                <  1:455920/150‑1 (MQ=255)                                                                                                                       cTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttggggtaggtcaggcgcgcacgccttctggcaaaggcagcgccagcaggcgctcgtccagcaggccaaggccctcctggaacagc                                                    <  1:605762‑M2/117‑87 (MQ=255)                                                                                                                       cTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttggggtaggtcaggcgcgcacgccttctggcaaaggcagcgccagcaggcgctcgtccagcaggccaaggccctcctggaacagc                                                    >  2:605762‑M2/1‑31 (MQ=255)                                                                                                                       cTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGaa                                                                                               <  1:678761/74‑1 (MQ=255)                                                                                                                       cTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGaa                                                                                               >  2:678761/1‑74 (MQ=255)                                                                                                                       cTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATGTAGCTTTCGCGGTCGGTTTGATCGGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTTCTGTCGt                   >  2:222892/1‑150 (MQ=255)                                                                                                                          ccccAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGcc                >  2:866/1‑150 (MQ=255)                                                                                                                          ccccAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGcc                <  1:555259/150‑1 (MQ=255)                                                                                                                           cccAAGGCCCGCGCAAAGGTGCGGGCTttggggtgggtcaggcgcgcacgccttctggcaaaggcagcgccagcaggcgctcgtccagcaggccaaggccctcctg                                                           <  1:591970‑M2/106‑80 (MQ=255)                                                                                                                           cccAAGGCCCGCGCAAAGGTGCGGGCTttggggtgggtcaggcgcgcacgccttctggcaaaggcagcgccagcaggcgctcgtccagcaggccaaggccctcctg                                                           >  2:591970‑M2/1‑27 (MQ=255)                                                                                                                           cccAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCat                                                                 >  1:630693/1‑100 (MQ=255)                                                                                                                           cccAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCat                                                                 <  2:630693/100‑1 (MQ=255)                                                                                                                            ccAAGGCCCGCGCAAAGGTGCGGGCTttgggggcaggtcaggcgcgcacgccttctggcaaaggcagcgccagcaggcgctcgtccagcaggccaaggccctcctggaacagctggttgctgcgctcggtctcgcccagccccgcgagca              <  1:612061‑M2/150‑125 (MQ=255)                                                                                                                             cAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTg             >  1:503800/1‑150 (MQ=255)                                                                                                                                ggCCCGCGCAAAGGTGCGGGCTttggggtaggtcaggcgcgcacgccttctggcaaaggcagcgc                                                                                               <  1:661728‑M2/65‑44 (MQ=255)                                                                                                                                ggCCCGCGCAAAGGTGCGGGCTttggggtaggtcaggcgcgcacgccttctggcaaaggcagcgc                                                                                               >  2:661728‑M2/1‑22 (MQ=255)                                                                                                                                   ccGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTGAAACaa       >  2:691211/1‑150 (MQ=255)                                                                                                                                       gcAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGc                         <  2:181762/128‑1 (MQ=255)                                                                                                                                       gcAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGc                         >  1:181762/1‑128 (MQ=255)                                                                                                                                        cAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTGAAACAAAGCgt  <  2:324874/150‑1 (MQ=255)                                                                                                                                        cAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTCGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTGAAACAAAGCgt  <  2:503800/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                         CGCCTGCTCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTGAAACAAAGCGT  >  NC_002947/241952‑242236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.