New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5138301 =	35 (1.240)	4 (0.150)	4/236	NT	10.7%	coding (440/963 nt)	PP_4523	agmatinase
	?	NC_002947	5138332 =	33 (1.220)					coding (471/963 nt)	PP_4523	agmatinase

CGAAGAAGCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTGCGCGCCCAGGGCTACACCGCCGACGACTTCAACTGGAGCCGTC  >  NC_002947/5138188‑5138480                                                                                                                                                 |                                                                                                                                                     cGAAGAAGCGTATGACGAGATCGTCAAACACAACGTCATTCCCATGACCCTAGGGGTCGATCACCCCATCACCCTGCCGATACTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTAGTACAAATCGATGCCCACGCCGACGTCaa                                                                                                                                                 >  1:82969/1‑150 (MQ=255)    agaagCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGa                                                                                                                                              <  2:466915/150‑1 (MQ=255)     gaagCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGAc                                                                                                                                             <  2:93137/150‑1 (MQ=255)                cGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCgg                                                                                                                                  <  2:608772/150‑1 (MQ=255)                 gagaTCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGc                                                                                                                                 <  2:139306/150‑1 (MQ=255)                        tcgAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGagaaga                                                                                                                          >  1:134119/1‑150 (MQ=255)                          gcggtcgcagtcgagcaggccttcttccacggcgcggcggaaggtggtgccgtgggcgatcttctcgccgaacatgtggtcgttgacgTCGGCCTGGTACACATCGATGCCCACGCCGACGTCAAc                                                                                                                                                <  1:388799‑M1/38‑1 (MQ=255)                          gcggtcgcagtcgagcaggccttcttccacggcgcggcggaaggtggtgccgtgggcgatcttctcgccgaacatgtggtcgttgacgTCGGCCTGGTACACATCGATGCCCACGCCGACGTCAAc                                                                                                                                                >  2:388799‑M1/89‑126 (MQ=255)                                  cGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACgg                                                                                                                >  1:256438/1‑150 (MQ=255)                                  agtcgagcaggccttcttccacggcgcggcggaaggtggtgccgtgggcgatcttctcgccgaacatgtggtcgttgacgTCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACcac                                                                                                                                          >  1:559169‑M1/81‑124 (MQ=255)                                  agtcgagcaggacttcttccacggcgcggcggaaggtggtgccgtgggcgatcttctcgccgaacatgtggtcgttgacgTCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACcac                                                                                                                                          <  2:559169‑M1/44‑1 (MQ=255)                                     cATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGcac                                                                                                             <  2:117508/150‑1 (MQ=255)                                          ccATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCt                                                                                                        >  2:337401/1‑150 (MQ=255)                                          ccATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCt                                                                                                        >  1:547837/1‑150 (MQ=255)                                            aTGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTc                                                                                                      >  1:311873/1‑150 (MQ=255)                                                cccTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTccgcc                                                                                                  >  1:365912/1‑150 (MQ=255)                                                            aTCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGgaag                                                                                      >  1:499910/1‑150 (MQ=255)                                                            aTCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCGGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGgaag                                                                                      >  1:92294/1‑150 (MQ=255)                                                             tCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGgaaga                                                                                     >  2:392634/1‑150 (MQ=255)                                                                 acCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGc                                                                                 <  2:458453/150‑1 (MQ=255)                                                                   cATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCt                                                                               >  1:508226/1‑150 (MQ=255)                                                                       aCCCTGCCGATCCTGCGTGCTCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTc                                                                                                                                    <  2:552768/93‑1 (MQ=255)                                                                       aCCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTc                                                                                                                                    >  1:552768/1‑93 (MQ=255)                                                                         ccTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGa                                                                         <  2:40519/150‑1 (MQ=255)                                                                         ccTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGa                                                                         <  2:40508/150‑1 (MQ=255)                                                                               gATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGa                                                                   >  2:276812/1‑150 (MQ=255)                                                                                     gcgtgcgCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGTGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCgt                                                             <  2:118977/150‑1 (MQ=255)                                                                                     gcgtgcgCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCgt                                                             <  2:547837/150‑1 (MQ=255)                                                                                        tgcgCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCtt                                                                                                       >  2:637513/1‑105 (MQ=255)                                                                                        tgcgCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCtt                                                                                                       <  1:637513/105‑1 (MQ=255)                                                                                        tgcgCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGGTGCGCCTTTTAAGAAGGCCTGCTCCACTGCGACCGCgtggt                                                          <  1:707575/150‑1 (MQ=255)                                                                                                     gtggtcgttgacgtcggcgtgggcatcgatgtgtaccaggccgaCGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGTCCTGCTCGACt                                                                       <  2:559169‑M2/80‑1 (MQ=255)                                                                                                     gtggtcgttgacgtcggcgtgggcatcgatgtgtaccaggccgaCGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACt                                                                       >  1:559169‑M2/45‑124 (MQ=255)                                                                                                         acGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTgcgcg                                         >  1:634016/1‑150 (MQ=255)                                                                                                           gttgacgtcggcgtgggcatcgatgtgtaccaggccgaCGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACcgc                                                               <  1:388799‑M2/88‑1 (MQ=255)                                                                                                           gttgacgtcggcgtgggcatcgatgtgtaccaggccgaCGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACcgc                                                               >  2:388799‑M2/39‑126 (MQ=255)                                                                                                           ggCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCgtg                                                            <  1:76644/129‑1 (MQ=255)                                                                                                           ggCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCgtg                                                            >  2:76644/1‑129 (MQ=255)                                                                                                                        tGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTGCGCACCCAGGGCTACAccg                          >  2:522947/1‑150 (MQ=255)                                                                                                                                aTCGATGCCCACGCCGACGTCAATGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTGCGCGCCCAGGGCTACACCGCCgacgac                  >  2:26499/1‑150 (MQ=255)                                                                                                                                aTCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTGCGCGCCCAAGGCTCCACGGCcgacgcc                  >  2:606476/1‑148 (MQ=255)                                                                                                                                            gccgaCGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTGCGCGCCCAGGGCTACACCGCCGACGACTTCAACTGGAGc      <  2:452971‑M2/145‑1 (MQ=255)                                                                                                                                                aCGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTGCGCGCCCAGGGCTACACCGCCGACGACTTCAACTGGAGCCGTc  <  2:256438‑M2/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     CGAAGAAGCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTGCGCGCCCAGGGCTACACCGCCGACGACTTCAACTGGAGCCGTC  >  NC_002947/5138188‑5138480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.