New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3581709	19 (0.660)	8 (0.280)	6/260	2.8	29.8%	coding (762/942 nt)	PP_3160	hypothetical protein
	?	NC_002947	= 3581745	19 (0.670)					coding (798/942 nt)	PP_3160	hypothetical protein

TTCGACAGTACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3581560‑3581709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaTGTCTCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAA  <  NC_002947/3581745‑3581677                                                                                                                                                                                                                             TTCGACAGTACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAA                                                                       >  1:395350/1‑150       AGTACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAACTGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAATGTCTC                                                                 >  2:462316/1‑150       AGTACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAACAGCCGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAATGTCTC                                                                 >  2:462172/1‑150                                                                      CAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAATGTCTCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCATGTTAAA  <  1:462172/150‑1                                                                      CAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAATGTCTCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAA  <  1:462316/150‑1                                                                               AAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAAT                                                                      <  1:396501/73‑1                                                                               AAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAAT                                                                      >  2:396501/1‑73                                                                                                     AAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAATGTCTCCCGGGCTGCTTGGGCATCCACCGG                                         <  1:61353/80‑1                                                                                                     AAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAATGTCTCCCGGGCTGCTTGGGCATCCACCGG                                         >  2:61353/1‑80                                                                                                                                                                                                                             TTCGACAGTACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3581560‑3581709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaTGTCTCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAA  <  NC_002947/3581745‑3581677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.