New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5105810 =	47 (1.280)	8 (0.230)	7/262	3.1	16.0%	coding (2350/3021 nt)	ydiJ	putative oxidoreductase
	?	NC_002947	5105836 =	39 (1.100)					coding (2324/3021 nt)	ydiJ	putative oxidoreductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCTGTCGACCATGCCCACCTTGTCGGCCAGC  >  NC_002947/5105664‑5105958                                                                                                                                                   |                                                                                                                                                     aaaCGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTTCTGCACCAg                                                                                                                                                   >  1:524210/1‑150 (MQ=255)   aCGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGCTGAAGGCGTCCTGCACCAGCa                                                                                                                                                 >  2:17316/1‑150 (MQ=255)                  ccTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTcgc                                                                                                                                  >  1:288081/1‑150 (MQ=255)                       aCGTGCAACGGCTTGCCGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTgg                                                                                                                             <  2:518055/150‑1 (MQ=255)                             aaCGGCTTGCCGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGCGACAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAACGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCggg                                                                                                                       <  1:698280/150‑1 (MQ=255)                              aCGGCTTGCCGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGAtgct                                                                                                                                          >  1:505848/1‑130 (MQ=255)                              aCGGCTTGCCGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGAtgct                                                                                                                                          <  2:505848/130‑1 (MQ=255)                                ggCTTGCCGTTGGCGCGGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTTAAGGCGTCCTTCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTc                                                                                                                    <  1:248870/150‑1 (MQ=255)                                    tGCCGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCt                                                                                                                <  1:420551/150‑1 (MQ=255)                                      ccGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCAcc                                                                                                                                                     >  1:369361/1‑111 (MQ=255)                                      ccGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCAcc                                                                                                                                                     <  2:369361/111‑1 (MQ=255)                                          tGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAg                                                                                                                                                   >  1:144473/1‑109 (MQ=255)                                          tGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAg                                                                                                                                                   <  2:144473/109‑1 (MQ=255)                                          tGGCGCCGTACAGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCa                                                                                                          >  1:284180/1‑150 (MQ=255)                                          tGGCGCCGTACAGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCa                                                                                                          >  1:880717/1‑150 (MQ=255)                                                          cAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGc                                                                                          >  2:182900/1‑150 (MQ=255)                                                             gaacagccGGTGACACAGGCGTTGGGCAAGGTCGATTAAGGCCGACAGCAGCGGCGTTTCGTAGTTGCGGGTGAAGGCGTCCTGTCCGAGCACGATGCTGCGCTCGCGTTAGGCCGGGGTTAGATCGTGCTGGGCCGGCACCGTGGCCAt                                                                                       <  2:236397/144‑1 (MQ=255)                                                                   ccGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAAc                                                                                 >  2:51672/1‑150 (MQ=255)                                                                   ccGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGATCGCGCAGGGCCGGCACCGTGGCCATGCCAAc                                                                                 >  2:849098/1‑150 (MQ=255)                                                                         gCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGAtg                                                                                                                                            <  2:374110/85‑1 (MQ=255)                                                                         gCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGAtg                                                                                                                                            >  1:374110/1‑85 (MQ=255)                                                                           ccAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCAcc                                                                                               <  2:373991/128‑1 (MQ=255)                                                                           ccAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCAcc                                                                                               >  1:373991/1‑128 (MQ=255)                                                                            cAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACg                                                                        <  1:51672/150‑1 (MQ=255)                                                                             aGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACgg                                                                       >  2:486513/1‑150 (MQ=255)                                                                             aGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACgg                                                                       <  2:880717/150‑1 (MQ=255)                                                                             aGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGATCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACgg                                                                       <  1:849098/150‑1 (MQ=255)                                                                                   tGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAgg                                                                 <  2:541139/150‑1 (MQ=255)                                                                                    gggCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAggg                                                                <  2:126960/150‑1 (MQ=255)                                                                                     ggCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGt                                                               >  1:40733/1‑150 (MQ=255)                                                                                      gCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGACGAAAGCATCCTGCACCAGCGCGATAATGCGCGCGCGCTAGGCCGGGGTGAGCTTGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGCCAACGGGGGAGGGtg                                                              >  2:471616/1‑149 (MQ=255)                                                                                              gATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGaa                                                      <  2:572719/150‑1 (MQ=255)                                                                                               aTGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAg                                                     >  2:393395/1‑150 (MQ=255)                                                                                                    ggCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGaa                                                <  1:393395/150‑1 (MQ=255)                                                                                                      ccGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGc                                              >  1:670966/1‑150 (MQ=255)                                                                                                          cagcagCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCt                                          <  1:486513/150‑1 (MQ=255)                                                                                                          cagcagCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCt                                          <  2:284180/150‑1 (MQ=255)                                                                                                                  gcgTTTCGAAGTAGAGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGATGATCAGCg                                  >  2:584101/1‑150 (MQ=255)                                                                                                                      ttCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCt                              <  1:182900/150‑1 (MQ=255)                                                                                                                        cGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCTGt                            <  2:115655/150‑1 (MQ=255)                                                                                                                          aaGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCTGTCg                          >  1:767621/1‑150 (MQ=255)                                                                                                                              aGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCTGTCGACCa                      <  2:288081/150‑1 (MQ=255)                                                                                                                                cGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCTGTCGACCATg                    <  1:504853/150‑1 (MQ=255)                                                                                                                                      aaGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCTGTCGACCATGCCCAcc              <  2:767621/150‑1 (MQ=255)                                                                                                                                        ggCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCTGTCGACCATGCCCACCtt            >  2:160409/1‑150 (MQ=255)                                                                                                                                               tGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCTGTCGACCACGCCCACCTTGTCGGcc     >  2:694357/1‑150 (MQ=255)                                                                                                                                                  aCCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACCACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCTGTCGACCCTGGCCACCGTGTCGGCcagc  >  2:436703/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                     AAACGCGCCAAGGAAACCCTGTACGTGCAACGGCTTGCCGTTGGCGCTGTACGGCGCCAGGAATACCCGGTGGCCCAGGCGGTGGGCAAGGTCGATGAAGGCCGACAGCAGCGGCGTTTCGAAGTAGCGGGTGAAGGCGTCCTGCACCAGCACGATGCTGCGCTCGCGCTGGGCCGGGGTCAGCTCGCGCAGGGCCGGCACCGTGGCCATGCCAACGCGACAACGGGTCAGGGTAGCCTGGAAGTTGAAGCGGCTGATCAGCGGGCTGTCGACCATGCCCACCTTGTCGGCCAGC  >  NC_002947/5105664‑5105958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.