New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2302573 =	31 (1.340)	3 (0.140)	3/234	NT	12.2%	coding (242/267 nt)	PP_2026	hypothetical protein
	?	NC_002947	2302663 =	14 (0.650)					coding (152/267 nt)	PP_2026	hypothetical protein

CAATGCCGGTGAACCCGGTATCAACATGCTGGTCAACGCAGTGCATCACGTGCAGATGACCAGAGCGCTGGCCGAGTTGCTGCTACACCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2302665‑2302573 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccggcaTTGGCGCAGATGTATTCGTCCAGCGAGTCTTCGATGCCGGCCATCAACTGGAGGGTGTGGGTCAGGGCGTCAACCGAAGGCGTGTCCTGGTTGATGGTGTAGAAGGGGCGGGCTGTCAGGATTGCAGGAGGATCGGGGACGATCT  >  NC_002947/2302663‑2302807                                                                                                                                                                                                                                                CAATGCCGGTGAACCCGGTATCAACATGCTGGTCAACGCAGTGCATCACGTGCAGATGACCAGAGCGCTGGCCGAGTTGCTGCTACACCGGCATTGGCGCAGATGTACTCGTCCAGCGAGTCTTCGATGCCGGCCATCAACTGGAGGGTG                                                                                          >  2:575276/1‑150    TGCCGGTGAACCCGGTATCAACATGCTGGTCAACGCAGTGCATCACGTGCAGATGACCAGAGCGCTGGCCGAGTTGCTGCTACACCGGCATTGGCGCAGATGTATTCGTCCAGCGAGTCTTCGATGCCGGCCATCAACTGGAGGGTGTGG                                                                                       >  2:411206/1‑150                                           GCATCACGTGCAGATGACCAGAGCGCTGGCCGAGTTGCTGCTACACCGGCATTGGCGCAGATGTACTCGTCCAGCGAGTCTTCGATGCCGGCCATCAACTGGAGGGTGTGGGTCAGGGCGTCAACCGAAGGCGTGTCCTGGTTGATGGTG                                                <  1:575276/150‑1                                                                                         CGGCATTGGCGCAGATGTATTCGTCCAGCGAGTCTTCGATGCCGGCCATCAACTGGAGGGTGGGGGTCAGGGCGTCAACCGAAGGCGTGTCCTGGTTGATGGTGTAGAAGGGTCGGGCAGACAGGATTGCAGGAGGATCAGCGCCGATgt  >  2:192065/1‑148                                                                                                                                                                                                                                                CAATGCCGGTGAACCCGGTATCAACATGCTGGTCAACGCAGTGCATCACGTGCAGATGACCAGAGCGCTGGCCGAGTTGCTGCTACACCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2302665‑2302573 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccggcaTTGGCGCAGATGTATTCGTCCAGCGAGTCTTCGATGCCGGCCATCAACTGGAGGGTGTGGGTCAGGGCGTCAACCGAAGGCGTGTCCTGGTTGATGGTGTAGAAGGGGCGGGCTGTCAGGATTGCAGGAGGATCGGGGACGATCT  >  NC_002947/2302663‑2302807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.