New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2907209	28 (1.210)	3 (0.140)	3/238	NT	9.6%	coding (217/1359 nt)	PP_2558	outer membrane efflux protein
	?	NC_002947	= 2907231	30 (1.360)					coding (195/1359 nt)	PP_2558	outer membrane efflux protein

AACGGCTGGCGCAGGCGCACGTTGGCGCCCTTGGAGTCATAGTCGAGGTCATTGTCCTGGCCATTCTGGCGCTGGCTGCCATTGACCTGGTTGAAGTAGGCCGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2907103‑2907209 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggcCGGCCTGCTGCCGCAGATCAACGCCTCGGCCTACTTCAACCAGGTCAATGGCAGCCAGCGCCAGAATGGCCAGGACAATGACCTCGACTATGACTCCAAGGGCGCCAACGTGCGCCTGCGCCAGCCGTTGTTCAACAAACAGAAGATG  <  NC_002947/2907231‑2907084                                                                                                                                                                                                                                                                 AACGGCTGGCGCAGGCGCACGTTGGCGCCCTTGGAGTCATAGTCGAGGTCATTGTCCTGGCCATTCTGGCGCTGGCTGCCATTGACCTGGTTGCAGTAGGCCGAGGCCGGCCTGCTGCCGCAGATCAACGCCTCGGCCTACTTCAACCAG                                                                                                           <  2:399772/150‑1                   ACGTTGGCGCCCTTGGAGTCATAGTCGAGGTCATTGTCCTGGCCATTCTGGCGCTGGCTGCCATTGACCTGGTTGAAGTAGGCCGAGGCCGGCCTGCTGCCGCAGATCAACGCCTCGGCC                                                                                                                       <  1:303438/120‑1                   ACGTTGGCGCCCTTGGAGTCATAGTCGAGGTCATTGTCCTGGCCATTCTGGCGCTGGCTGCCATTGACCTGGTTGAAGTAGGCCGAGGCCGGCCTGCTGCCGCAGATCAACGCCTCGGCC                                                                                                                       >  2:303438/1‑120                                                                                                         GGCCGGCCTGCTGCCGCAGATCAACGCCTCGGCCTACTTCAACCAGGTCAATGGCAGCCAGCGCCAGAATGGCCAGGACAATGACCTCGACTATGACTCCAAGGGCGCCAACGTGCGCCTGCGCCAGCCGTTGTTCAACAAACAGAAGAT   >  2:281164/1‑150                                                                                                          GCCGGCCTGCTGCCGCAGATCAACGCCTCGGCCTACTTCAACCAGGTCAATGGCAGCCAGCGCCAGAATGGCCAGGACAATGACCTCGACTATGACTCCAAGGGCGCCAACGTGCGCCTGCGCCAGCCGTTGTTCAACAAACAGAAGATG  <  1:525445/150‑1                                                                                                                                                                                                                                                                 AACGGCTGGCGCAGGCGCACGTTGGCGCCCTTGGAGTCATAGTCGAGGTCATTGTCCTGGCCATTCTGGCGCTGGCTGCCATTGACCTGGTTGAAGTAGGCCGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2907103‑2907209 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggcCGGCCTGCTGCCGCAGATCAACGCCTCGGCCTACTTCAACCAGGTCAATGGCAGCCAGCGCCAGAATGGCCAGGACAATGACCTCGACTATGACTCCAAGGGCGCCAACGTGCGCCTGCGCCAGCCGTTGTTCAACAAACAGAAGATG  <  NC_002947/2907231‑2907084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.