New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4012762 = | 29 (1.250) | 6 (0.270) | 6/238 | NT | 19.8% | coding (554/900 nt) | mvaB | hydroxymethylglutaryl‑CoA lyase |
? | NC_002947 | 4012782 = | 21 (0.950) | coding (574/900 nt) | mvaB | hydroxymethylglutaryl‑CoA lyase |
CGGCTACCGAGCTGTCGAATACGCTGATGCCCTCGAGCAGGCTGGCATAGACGTTAGCCAAGGCCTGGCCGTAAGTGTCATGGAAGTGTCCGGCCAACTGCTCGCGCGGTACCTGGGCCGACACCACCTCGAACAGGCGTCGGGTGTCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4012914‑4012762 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTCGACAGCTCGGTAGCCGGGCTGGGCGGCTG > NC_002947/4012782‑4012927 CGGCTACCGAGCTGTCGAATACGCTGATGCCCTCGAGCAGGCTGGCATAGACGTTAGCCAAGGCCTGGCCGTAAGTGTCATGGAAGTGTCCGGCCAACTGCTCGCGCGGTACCTGGGCCGACACCACCTCGAACAGGCGTCGGGTGTCGC < 2:462210/150‑1 CACCTCGAACAGGCGTCGGGTGTCGCCTGTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACA > 1:183354/1‑87 CACCTCGAACAGGCGTCGGGTGTCGCCTGTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACA < 2:183354/87‑1 TCGAACAGGCGTCGGGTGTCGCCTGTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGG < 1:472062/95‑1 TCGAACAGGCGTCGGGTGTCGCCTGTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGG > 2:472062/1‑95 GCGTCGGGTGTCGCCTGTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTT > 1:254327/1‑91 GCGTCGGGTGTCGCCTGTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTT < 2:254327/91‑1 CCTGTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGG < 1:135106/107‑1 CCTGTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGG > 2:135106/1‑107 CCTGTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCAAGGCCTTTGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTCGACAGCTCGGTAGCCGGGCTGGGCGGCTG < 2:271886/150‑1 CGGCTACCGAGCTGTCGAATACGCTGATGCCCTCGAGCAGGCTGGCATAGACGTTAGCCAAGGCCTGGCCGTAAGTGTCATGGAAGTGTCCGGCCAACTGCTCGCGCGGTACCTGGGCCGACACCACCTCGAACAGGCGTCGGGTGTCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4012914‑4012762 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgTTCGAGGTGGTGTCGGCCCAGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTCGACAGCTCGGTAGCCGGGCTGGGCGGCTG > NC_002947/4012782‑4012927 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |