New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4993002 | 29 (1.250) | 3 (0.140) | 3/236 | NT | 9.8% | coding (911/1233 nt) | bkdAA | branched‑chain alpha‑keto acid dehydrogenase complex subunit alpha |
? | NC_002947 | = 4993024 | 28 (1.280) | coding (933/1233 nt) | bkdAA | branched‑chain alpha‑keto acid dehydrogenase complex subunit alpha |
GGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4992851‑4993002 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgagtgCGGGCCGGCACGGTAGGTGACCCACTCGATCAGGCTTGGGCCCAGGCCGCGGCGGGCGCGCTCGGCCGCCCAGCGCGAGGCAGCGTACACGGCGACGAAGTCGTTGCCGTCAACCCGCAGCGAAGCAATACCGCAACCCACGCCA < NC_002947/4993024‑4992880 GGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAG < 2:452646/150‑1 GTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGT < 1:209538/150‑1 GGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGCGGGCCGGCACGGTAGGTGACCCACTCGATCAGGCTTGGG < 2:291253/150‑1 GGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGCGGGCCGGCACGGTAGGTGACCCACTCGATC > 1:404096/1‑124 GGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTGCGGGCCGGCACGGTAGGTGACCCACTCGATC < 2:404096/124‑1 GAGTGCGGGCCGGCACGGTAGGTGACCCACTCGATCAGGCTTGGGCCCAGGCCGCGGCGGGCGCGCTCGGCCGCCCAGCGCGAGGCAGCGTACACGGCGACGAAGTCGTTGCCGTCAACCCGCAGCGAAGCAATACCGCAACCCACGCCA > 2:562802/1‑150 GGTGGCGAGTCGACCACCTTTGCCGGCCGTGGCGTGGGTTGCGGTATTGCTTCGCTGCGGGTTGACGGCAACGACTTCGTCGCCGTGTACGCTGCCTCGCGCTGGGCGGCCGAGCGCGCCCGCCGCGGCCTGGGCCCAAGCCTGATCGAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4992851‑4993002 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgagtgCGGGCCGGCACGGTAGGTGACCCACTCGATCAGGCTTGGGCCCAGGCCGCGGCGGGCGCGCTCGGCCGCCCAGCGCGAGGCAGCGTACACGGCGACGAAGTCGTTGCCGTCAACCCGCAGCGAAGCAATACCGCAACCCACGCCA < NC_002947/4993024‑4992880 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |