New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5386494 = | 24 (1.040) | 4 (0.180) | 4/238 | NT | 15.7% | intergenic (+31/‑45) | lldD/dld2 | L‑lactate dehydrogenase/D‑lactate dehydrogenase |
? | NC_002947 | 5386527 = | 20 (0.910) | intergenic (+64/‑12) | lldD/dld2 | L‑lactate dehydrogenase/D‑lactate dehydrogenase |
TAGAAGCTGGCGTCGGTGCCGAAGGCCAGGGTGGAGGTGGGGTCGTCGAAGCGGCGTTCGGCGGGGATCAGGCGCTCGGCATCACGCAGGAACGCGGCGGGCAGGCTCATGCAGTCTCCTCGCGGGGCTGTGGCGTCTGTGCGCTACATGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5386648‑5386494 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccgCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTG > NC_002947/5386527‑5386673 TAGAAGCTGGCGTCGGTGCCGAAGGCCAGGGTGGAGGTGGGGTCGTCGAAGCGGCGTTCGGCGGGGATCAGGCGCTCGGCATCACGCAGGAACGCGGCGGGCAGGCTCATGCAGTCTCCTCGCGGGGCTGTGGCGTCTGTGCGCTACATG < 1:382766/150‑1 AGAAGCTGGCGTCGGTGCCGAAGGCCAGGGTGGAGGTGGGGTCGTCGAAGCGGCGTTCGGCGGGGATCAGGCGCTCGGCATCACGCAGGAACGCGGCGGGCAGGCTCATGCAGTCTCCTCGCGGGGCTGTGGCGTCTGTGCGCTACATGC < 2:28868/150‑1 GCAGTCTCCTCGCGGGGCTGTGGCGTCTGTGCGCTACATGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGC > 1:516281/1‑150 GCTGTGGCGTCTGTGCGCTACATGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCC > 1:361314/1‑63 GCTGTGGCGTCTGTGCGCTACATGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCC < 2:361314/63‑1 CTGTGCGCTACATGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGAT < 2:516281/150‑1 GCCCCGCGAGGGGACTGCATGAGCCTGCACGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCCCCGACGCCCGCTTCTACCGCTTGATCCGCAAGCTGGTG > 2:29625/1‑150 CCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTG > 2:597211/1‑150 TAGAAGCTGGCGTCGGTGCCGAAGGCCAGGGTGGAGGTGGGGTCGTCGAAGCGGCGTTCGGCGGGGATCAGGCGCTCGGCATCACGCAGGAACGCGGCGGGCAGGCTCATGCAGTCTCCTCGCGGGGCTGTGGCGTCTGTGCGCTACATGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5386648‑5386494 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccgCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTG > NC_002947/5386527‑5386673 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |