New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5386494 =	24 (1.040)	4 (0.180)	4/238	NT	15.7%	intergenic (+31/‑45)	lldD/dld2	L‑lactate dehydrogenase/D‑lactate dehydrogenase
	?	NC_002947	5386527 =	20 (0.910)					intergenic (+64/‑12)	lldD/dld2	L‑lactate dehydrogenase/D‑lactate dehydrogenase

CGCGTGGCCATGGTGCTGACCGGTGCCAAGTCGATCAGCGAGATCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGC  >  NC_002947/5386383‑5386676                                                                                                                                                 |                                                                                                                                                      cgcgTGGCCATGGTGCTGACCGGTGCCAAGTCGATCAGCGAGATCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCgagga                                                                                                                                                  <  1:192337/150‑1 (MQ=255)    gTGGCCATGGTGCTGACCGGTGCCAAGTCGATCAGCGAGATCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGAc                                                                                                                                               >  1:530432/1‑150 (MQ=255)       gccgaaggccagggtggaggtggggtcgtcgaagcggcgttcggcggggatcaggcgctcggcatcacgcaggaacgcggcgggcaggctcatgcagtctcctcgCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGc                                                                                                                                            >  1:516281‑M1/106‑150 (MQ=255)             gTGCTGACCGGTGCCAAGTCGATCAGCGAGATCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGc                                                                                                                                      <  2:614635/150‑1 (MQ=255)                           cAAGTCGATCAGCGAGATCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGtt                                                                                                                        >  1:581715/1‑150 (MQ=255)                            aaGTCGATCAGCGAGATCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGGCTGCCCGCCGCGTTc                                                                                                                       >  1:613654/1‑150 (MQ=255)                               tCGATCAGCGAGATCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTg                                                                                                                    >  2:475249/1‑150 (MQ=255)                                 taTCAGCGAGATCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCg                                                                                                                  >  2:247278/2‑150 (MQ=255)                                        gagaTCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGcc                                                                                                           >  2:440562/1‑150 (MQ=255)                                            tCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAgc                                                                                                       <  2:198811/150‑1 (MQ=255)                                                                cgcgAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAAcgc                                                                                   >  1:37262/1‑150 (MQ=255)                                                                              cTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGc                                                                                                                                      >  2:448335/1‑85 (MQ=255)                                                                              cTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGc                                                                                                                                      <  1:448335/85‑1 (MQ=255)                                                                                      cTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCa                                                             >  1:172593/1‑150 (MQ=255)                                                                                      cTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCa                                                             >  1:40469/1‑150 (MQ=255)                                                                                         cAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCAccc                                                          >  1:172537/1‑150 (MQ=255)                                                                                          aaGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCt                                                         <  1:451222/150‑1 (MQ=255)                                                                                                 accGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTc                                                  <  1:64969/150‑1 (MQ=255)                                                                                                  ccGCGTGAATCACCGGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTTATGCCGCGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCg                                                 <  2:10885/150‑1 (MQ=255)                                                                                                    gcagtctcctcgcggggctgtggcgtctgtgcgctacatgccccgCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGc                                               >  1:516281‑M2/46‑150 (MQ=255)                                                                                                              cccGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCa                                     >  2:325478/1‑150 (MQ=255)                                                                                                                    gctgtggcgtctgtgcgctacatgccccgCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTcc                                                                                                                      <  2:361314‑M2/34‑1 (MQ=255)                                                                                                                    gctgtggcgtctgtgcgctacatgccccgCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTcc                                                                                                                      >  1:361314‑M2/30‑63 (MQ=255)                                                                                                                    GCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCt                               <  2:28868‑M1/150‑1 (MQ=255)                                                                                                                     CATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTa                              <  1:382766‑M1/150‑1 (MQ=255)                                                                                                                              ctgtgcgctacatgccccgCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGAt                     <  2:516281‑M2/131‑1 (MQ=255)                                                                                                                                   aCGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCa                <  2:172537/150‑1 (MQ=255)                                                                                                                                         caGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCtgg          <  1:247278/150‑1 (MQ=255)                                                                                                                                           gccccgCGAGGGGACTGCATGAGCCTGCACGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCCCCGACGCCCGCTTCTACCGCTTGATCCGCAAGCtggtg        >  2:29625‑M2/7‑150 (MQ=255)                                                                                                                                              ccgCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGgtggtg     >  2:597211‑M2/4‑150 (MQ=255)                                                                                                                                                 cgAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCCCCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTgcgc  <  2:581715/150‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                      CGCGTGGCCATGGTGCTGACCGGTGCCAAGTCGATCAGCGAGATCACCCGCGACTCGCTGGTACGCGAACTGGGCGCCTGAACGCCTGCAAGAACCACCGCCTGAATGACCCGGGGCATGTAGCGCACAGACGCCACAGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTGCGC  >  NC_002947/5386383‑5386676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.